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cn_combo_scaffold_11782_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..1306

Top 3 Functional Annotations

Value Algorithm Source
ribosomal protein S12 methylthiotransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003053937 similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 434.0
  • Bit_score: 762
  • Evalue 2.40e-217
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 434.0
  • Bit_score: 767
  • Evalue 1.00e-218
MiaB-like tRNA modifying protein YliG similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 434.0
  • Bit_score: 760
  • Evalue 3.40e-217

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
TTCGTCAGCCTCGGCTGCCCCAAGGCGCTGGTGGACTCCGAGCGCATCCTCACCCAGCTGCGGGGGGAGGGCTACGACCTGGTGCAGGCCTACGACGACGCCGACGTGGTGGTGGTCAACACCTGCGGTTTCATCGATTCCGCGGTGGCCGAATCACTGGACGCGATCGGCGAGGCGATGGCGGAGAACGGCAAGGTCATCGTCACCGGCTGCCTGGGCAAGCGCGCCGACGTGATCCGCGAAGCGCATCCGGGCGTGCTGTCGATCAGCGGCCCGCAGGACTACGCCAGCGTGATGGACGCGGTGCACGCGGCAGTGCCGCCGACGCACAACCCCTTCGTGGACCTGCTGCCGGACTACGGCCTCAAGCTCACGCCCAAGCACTACGCTTACCTGAAGATTTCCGAAGGCTGCAACCACCGCTGCAGCTTCTGCATCATCCCGTCGATGCGCGGCGACCTGGTCTCGCGCCCGGTCGACGAGGTGCTGCGCGAGGCCGAGAAGCTGGTGCGCGGCGGGGTCAAGGAGCTGCTGGTGGTCTCGCAGGACACCAGCGCCTACGGCGTCGACCTGAAGTACGCGCCGCGACTGTGGGGCAACAATGTCTACGAGACGCGGATGAAGGCGCTGTGCGAGGGCCTGTCCACGCTGGGCGTGTGGACGCGCCTGCACTACGTGTATCCGTACCCGCACGTCGACGACGTGATCCCGCTGATGGCCGAGGGCAAGGTGCTGCCGTACCTCGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTCAGGCTGATGAAGCGGCCTGGCGCGGTGGACAAGACGCTGGAGCGCATCCAGCGCTGGCGCGCGATCTGCCCGGACCTCACCCTGCGCAGCACCTTCATCGTCGGCTTCCCCGGCGAGACCGATGCCGAGTTCGAGGAGCTGCTGGATTTCCTCGACGAGGCGCAGCTGGACCGCGTGGGCGCGTTCGCCTATTCGCCGGTCACCGGCGCCAAGGCCAACGAGCTGCCGGACCCCGTGCCGGAAGCGGTGAAGCAGGAGCGGCTGGCCCGCTTCATGGAGCGGCAGGCGGCGATTTCCGAAGCGCGCCTGGCGGCAAAGGTCGGCACCGTGCAGCGCTGCCTGGTGGATGCGATCGACGGCGAGCTCGCCATCGCCCGTTCGATGGCCGATGCGCCGGAGATCGACGGCCTGGTGCAGATCCAGGACGGCCGCGAAGCCGGCCTGGTGCCGGGCGAGTTCGTCAACGTGCGGATCATGGGCAGCGACGAGCACGACTTGTACGGGGAAGTCGAGTACAACGACTGA
PROTEIN sequence
Length: 435
FVSLGCPKALVDSERILTQLRGEGYDLVQAYDDADVVVVNTCGFIDSAVAESLDAIGEAMAENGKVIVTGCLGKRADVIREAHPGVLSISGPQDYASVMDAVHAAVPPTHNPFVDLLPDYGLKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAEKLVRGGVKELLVVSQDTSAYGVDLKYAPRLWGNNVYETRMKALCEGLSTLGVWTRLHYVYPYPHVDDVIPLMAEGKVLPYLDIPFQHASPRILRLMKRPGAVDKTLERIQRWRAICPDLTLRSTFIVGFPGETDAEFEELLDFLDEAQLDRVGAFAYSPVTGAKANELPDPVPEAVKQERLARFMERQAAISEARLAAKVGTVQRCLVDAIDGELAIARSMADAPEIDGLVQIQDGREAGLVPGEFVNVRIMGSDEHDLYGEVEYND*