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cn_combo_scaffold_11970_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3138..3764)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T1L4_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 210.0
  • Bit_score: 272
  • Evalue 4.70e-70
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KGQ20793.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 197.0
  • Bit_score: 281
  • Evalue 8.30e-73
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 185.0
  • Bit_score: 266
  • Evalue 5.60e-69

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGACCTTCGAACCTTGCCCGCCCGCCCCTTCCCGCCAGCGACGCCTGCCCGTACGCTGGGCCCCGTGAACGCGCCGGACAGCAGCGACGAATTCCTGATGCTGGCCTGGGTGGCCGGTGACGCCGCCGCGTTCGAACAACTCTATGCACGCCACCGCCTGAAGCTGTACCGCTATCTGTTGCGCCAGCTCCGCGACAACGCGCTGGCGGACGAGTTGTTCCAGGATGTCTGGCAGCGGGTGATCGCCGCCCGCGCAGGCTGGTCGCTGCCGTCGGCGGAATCCGGCTTCGCCACCTGGCTCTACACCATCGCCCACCATCGCCTGGGCGACCACTGGCGCAGCCTGAAGCATCGCCCCGCCTCGCCGGCGGACGCGGACGAGCGGCTGGCGCGGCTTGCCGATGCGGACACGCCCGAACGCGTACTGTCGCAGTTCGAACGCCGCCGGCAACTGCAGCTCGCGCTGGACGACCTGCCCGGGGAACAGCGCGAGGTGTTGCTGCTGCGCCTGGAGCAGGAACTGACCCTGGAGGAAATCGGCGCGGTGACCGGGGTGGGCCGGGAAACCGTGAAATCCCGCCTCCGTTACGCCATGGACAAGCTGCGCGCGAGACTCCCGTCATGA
PROTEIN sequence
Length: 209
MDLRTLPARPFPPATPARTLGPVNAPDSSDEFLMLAWVAGDAAAFEQLYARHRLKLYRYLLRQLRDNALADELFQDVWQRVIAARAGWSLPSAESGFATWLYTIAHHRLGDHWRSLKHRPASPADADERLARLADADTPERVLSQFERRRQLQLALDDLPGEQREVLLLRLEQELTLEEIGAVTGVGRETVKSRLRYAMDKLRARLPS*