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cn_combo_scaffold_12188_6

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3832..5238)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose- similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 467.0
  • Bit_score: 812
  • Evalue 2.30e-232
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS82_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 458.0
  • Bit_score: 794
  • Evalue 6.10e-227
deoxyxylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 458.0
  • Bit_score: 794
  • Evalue 1.70e-227

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
GGCGGCATGGACGAGGAACCGGACATCCTGGTGATCCTCAACGACAACCGCATGTCGATCAGCGAGGCGGTGGGCGGGCTGACCAAGATGCTCGGGCGCATGTCCGGCAACCGCACCCTCAACGCGATCCGCGAGGGCGGCAAGAAGCTGCTGGGCGACAAGCGCAACCCGCCGGCGCGCTTCGTCAAGCGCTGGGAAGAACACTGGAAAGGCATGTTCGTGCCATCCACCCTGTTCGAGCAGATGGGCTTCCACTACACCGGCCCGATCGACGGTCACGACACCGACGCCCTGCTGCAGACGCTGAAGACGCTGAAGGGCCTGAAAGGGCCGCAGCTGCTGCACGTCATCACCACCAAGGGCAAAGGCTACGAGCTGGCCGAAGGCGACCAGATCGGCTACCACGCGGTCAGCCCGTTCGACCCGTCCATCGGCGTGGTCGGCAAGCCCGCGGCGAAGAAGCCCACCTATACCGACGTATTCGGCGACTGGCTCTGCGACATGGCCGCCGCCGACCCCAAACTGCTCGGCATCACCCCGGCGATGCGCGAAGGCTCGGGGCTGGTGCGTTTCAGCCAGGAATACCCGGACCGCTATTTCGACGTCGCCATCGCCGAACAGCACGCGGTGACGCTGGCCGCCGGCATGGCCTGCGAAGGCGCGAAGCCCGTCGTGGCGATCTACTCCACCTTCCTGCAGCGCGGCTACGACCAGCTGGTGCACGACGTCGCCATCCAGGAACTGGACGTGCTGTTCGCCATCGATCGCGGCGGCGTGGTCGGCCCGGACGGTGCCACACATGCGGGTAACCTCGACCTCAGCTACCTGCGCTGCGTGCCGAACATGCTGGTGATGGCGCCGGCCGACGAGAACGAATGCCGGCAGATGCTGTCCACCGGCCACCACCACCCCGGCCCGGCCGCGGTGCGCTACCCGCGCGGCACCGGCCCGGGCGTGGCCGTGCAACCGGGCCTGGACACGCTGCCGGTCGGCAAGGCGCAGCTGCGCCGCAGCGGCGCGCGGATCGCCCTGCTCGCCTTCGGCGCGCTGGTGCCGGCGGCGCAGCAGGTGGGCGAGGAGCTGGGCCTCACAATGGTCAACATGCGCTTCGTCAAGCCGCTGGACCGCGCTCTGGTGCTCGAACTGGCGAACAGCCACGAAGGCTTCGTGACCCTTGAAGACAACGTGGTGGCAGGCGGCGCCGGCAGCGGCGTGGCCGAACTGCTGGCGGCCGAAGGCATCGTCCTGCCGATCCTGCACCTCGGGCTGCCCGATGCCTTCCAGCACCACGCCAGCCGCGAAGACCTGCTGGCCGAAGCCGGGCTGGACGTGGCCGGCATCCGCGCCGCGGTGCTGGAGCGCTGGCCGGAACTGCTGCAGCCGCCGCGCGCGCAGGCCGCCTCCTGA
PROTEIN sequence
Length: 469
GGMDEEPDILVILNDNRMSISEAVGGLTKMLGRMSGNRTLNAIREGGKKLLGDKRNPPARFVKRWEEHWKGMFVPSTLFEQMGFHYTGPIDGHDTDALLQTLKTLKGLKGPQLLHVITTKGKGYELAEGDQIGYHAVSPFDPSIGVVGKPAAKKPTYTDVFGDWLCDMAAADPKLLGITPAMREGSGLVRFSQEYPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVAIQELDVLFAIDRGGVVGPDGATHAGNLDLSYLRCVPNMLVMAPADENECRQMLSTGHHHPGPAAVRYPRGTGPGVAVQPGLDTLPVGKAQLRRSGARIALLAFGALVPAAQQVGEELGLTMVNMRFVKPLDRALVLELANSHEGFVTLEDNVVAGGAGSGVAELLAAEGIVLPILHLGLPDAFQHHASREDLLAEAGLDVAGIRAAVLERWPELLQPPRAQAAS*