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cn_combo_scaffold_12416_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..439

Top 3 Functional Annotations

Value Algorithm Source
betA; choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 144.0
  • Bit_score: 213
  • Evalue 1.90e-52
betA; choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 145.0
  • Bit_score: 191
  • Evalue 1.20e-46
Choline dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSN1_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 145.0
  • Bit_score: 191
  • Evalue 4.30e-46

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
CGCAGCCGCGGCAGCGTGCGGCTGGCCAGCAACCGCGCCGCCGACAAGCCGATCATCGACCCCAACTACCTTGGCGATGCGGAAGGTTTCGACCGCCGCATGCTGGTGGAATGCGCAAAACTGTCGCTGGAAATCCTGGCGCAGAAGGCATTCGATCCCTATCGCGGCGCGCCGATCTTCCCCGCCACGCCCCCGCGTACCGACGCCGAGTTCCTCGAGTTCGTGCGCAACCGCGCCGAAACCGTCTACCACCCCATCGGAACCTGCCGGATGGGCAGCGACGACACCGCGGTGGTCGACCCGCAGCTGCGCGTGCGCGGCGTGGACGGCCTGCGCGTGGTTGACGCCTCGGTGATGCCGGACCTGCCGGGTGGCAACACCAACGCGCCGACGATCATGATTGCGGAGCGGGCGGCGGACCTGATCAAGGCAAGCTGA
PROTEIN sequence
Length: 146
RSRGSVRLASNRAADKPIIDPNYLGDAEGFDRRMLVECAKLSLEILAQKAFDPYRGAPIFPATPPRTDAEFLEFVRNRAETVYHPIGTCRMGSDDTAVVDPQLRVRGVDGLRVVDASVMPDLPGGNTNAPTIMIAERAADLIKAS*