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cn_combo_scaffold_13621_4

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2527..2982

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein H n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003812314 similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 145.0
  • Bit_score: 165
  • Evalue 4.50e-38
NODE_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96773.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 142.0
  • Bit_score: 180
  • Evalue 1.50e-42
xpsH; general secretion pathway protein H similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 142.0
  • Bit_score: 162
  • Evalue 1.10e-37

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
GTGCGCGGCCGGTCGGCGGGCTTCACCCTGCTGGAGATGCTGGTGGTGCTGGCGATCATCGCGGCCGCCAGCCTGCTGGCGATGGCCGCGTTCGGCAACGGCCTGCGCGGTGCGCGCCTGCACGGCGCGGCGAAGGAGGTGGCCGCGCAGCTGCGCTTCACCCGGGCGCTGGCGATCGCCAGCGGCGCGCCGCAGGAGTTCGTGATCGACCCGGCCGCCCGCGCCTGGCGCGCGCCGAAGGGCCGCCACGGCCGCCTGCCGGACATCGGCGAGCTGGTCTTCACCGGCGCGCGCGACCTGCAGCCCACGGCCGGCGAAGGCGCGGTGCGCTTTTTTCCCGATGGCGCCGCCACCGGCGGGCGGGTGCGGCTGGCGGCCAACGGCGGCGGCTGGGATGTCGATGTGGCGTGGCTGACCGGCGAGGTGCGGGTGCGCCGGATCGGGGCCACGCGATGA
PROTEIN sequence
Length: 152
VRGRSAGFTLLEMLVVLAIIAAASLLAMAAFGNGLRGARLHGAAKEVAAQLRFTRALAIASGAPQEFVIDPAARAWRAPKGRHGRLPDIGELVFTGARDLQPTAGEGAVRFFPDGAATGGRVRLAANGGGWDVDVAWLTGEVRVRRIGATR*