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cn_combo_scaffold_18960_3

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(2526..3467)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , LysR family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XGF7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 322.0
  • Bit_score: 483
  • Evalue 1.60e-133
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM53991.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 322.0
  • Bit_score: 491
  • Evalue 8.00e-136
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 322.0
  • Bit_score: 480
  • Evalue 4.80e-133

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGCGAAAACCCCTGCCAGCGCGCTGCGTTTCGCCTACAAGGGCTCGCGCCTGAAGCCATTGCGCTCGATCTCGCGCGCCGCCGAGGCGCTCTACCTCAGCCAGCCGGCAGTGACCCTGCAGTTGCAGGCGCTGGAGCGCGAACTGGGGGTGCGGCTGCTGGAACGAGTCGGCCGCCGCCTGGTCCCCACCCGCGAAGGCGACCTGCTGTACGAGATGGCGCGCCCGCTGGTGGAGGGCCTGGACGGTCTGGCCGCCAGTTTCCGCGAGCAGGTGCGAGGGCTGGACGCCGGCGAACTGAACGTGGCGGCCGGCAGCTCCACCATCCTGTACCTGCTGCCGGGCATCGTCGATGCGTTCCGCCAGCGCCACCCCGACGTACGCCTGAGCCTGCACAACGTCACCGGCGCAAGCGGCCTGGACCTGCTGCGCAGCGACGGCGTGGACCTGGCGGTGGGCTCGATGCTGGACGTGCCGGCCGACCTGACCTACGCGCCGGTGTACCGCTTCGAACCGATGCTGATCACCCCGCCCGACCATCCGCTGGCCGGCAAGCGCGAGCTGTCGCTGGAGGACCTGTCGCCCTACGGGCTGATCCTGCCGCCCAAGCGCCTGACCACCTACCGGCTGGTCGACCTGGTGTTCCAGCAGAATCGCGTGCCCTACACCGTGGCGCTGGAGGTGGGCGGCTGGGAGGTGATCAAGCAGTACGTGGCGATGGGCCTGGGCATCAGTATCGTCACCGCGATCTGCCTGACCGAGGCCGACCGCCAGCGGCTGGCGGCGCGCTCGCTGGCGCGCTGGTTCCCCTCGCGCAGCTACGGCATCGTGATGCGCAAGGGCAAGTTCCTGTCAGCGCAGGCGCGCGCCTTCGTCGAGCTGATCCAGCCGGCGGCGCTCACGCCGCGCGGCTACGACGAGAGCGGGCATTCGGAGCGGTAG
PROTEIN sequence
Length: 314
MAKTPASALRFAYKGSRLKPLRSISRAAEALYLSQPAVTLQLQALERELGVRLLERVGRRLVPTREGDLLYEMARPLVEGLDGLAASFREQVRGLDAGELNVAAGSSTILYLLPGIVDAFRQRHPDVRLSLHNVTGASGLDLLRSDGVDLAVGSMLDVPADLTYAPVYRFEPMLITPPDHPLAGKRELSLEDLSPYGLILPPKRLTTYRLVDLVFQQNRVPYTVALEVGGWEVIKQYVAMGLGISIVTAICLTEADRQRLAARSLARWFPSRSYGIVMRKGKFLSAQARAFVELIQPAALTPRGYDESGHSER*