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cn_combo_scaffold_19742_1

Organism: CN-SCN_Xanthomonadaceae_48x

partial RP 7 / 55 MC: 5 BSCG 10 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 2..127

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit beta n=1 Tax=Xanthomonas axonopodis RepID=UPI0002ECA70C similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 40.0
  • Bit_score: 74
  • Evalue 3.80e-11
integration host factor, beta subunit similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 40.0
  • Bit_score: 74
  • Evalue 1.00e-11
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1300345 species="Bacteria; Proteobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 36.0
  • Bit_score: 74
  • Evalue 3.10e-11

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
ACCGGCCGCAATCCGAAGACCGGCGATGCCGTCGCCCTGCCGGGCAAGCATGTGCCGCACTTCAAGCCGGGCAAGGAACTGCGCGAGCGGGTCACCGGTGTGTTGCCGCTGCCTGTCCAGGACTGA
PROTEIN sequence
Length: 42
TGRNPKTGDAVALPGKHVPHFKPGKELRERVTGVLPLPVQD*