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cn_combo_scaffold_23

Alias: RUB134_2

Search features with annotation key words

Displaying items 121-150 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_23_121
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151699..154392)
DNA (2694bp) protein (898aa)
histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037164F2
cn_combo_scaffold_23_122
unknown

Not on your lists

comp(154385..154555)
DNA (171bp) protein (57aa)

This feature has no annotations

cn_combo_scaffold_23_123
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154574..156022)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXD3_RUBGI
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL97670.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_23_124
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156122..157846)
DNA (1725bp) protein (575aa)
Cation/acetate symporter ActP n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXD4_RUBGI
actP; cation/acetate symporter ActP
Cation/acetate symporter ActP {ECO:0000313|EMBL:BAL97671.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain N
cn_combo_scaffold_23_125
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157843..158151)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T2_PARDP
Membrane protein {ECO:0000313|EMBL:KGJ08669.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thioba
hypothetical protein
cn_combo_scaffold_23_126
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158677..159303)
DNA (627bp) protein (209aa)
DSBA oxidoreductase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJH3_POLNA
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABM35801.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivo
cn_combo_scaffold_23_127
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159300..159806)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLQ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09274.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_23_128
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159838..160755)
DNA (918bp) protein (306aa)
Putative hydroxymethylglutaryl-CoA lyase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXD9_RUBGI
putative hydroxymethylglutaryl-CoA lyase
Putative hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:BAL97676.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosu
cn_combo_scaffold_23_129
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160752..162770)
DNA (2019bp) protein (673aa)
mccA; 3-methylcrotonoyl-CoA carboxylase, alpha subunit MccA (EC:6.4.1.4)
3-methylcrotonoyl-CoA carboxylase, alpha subunit MccA {ECO:0000313|EMBL:BAL97677.1}; EC=6.4.1.4 {ECO:0000313|EMBL:BAL97677.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
3-methylcrotonoyl-CoA carboxylase, alpha subunit MccA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXE0_RUBGI
cn_combo_scaffold_23_130
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162776..163417)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSS5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73525.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
transmembrane protein
cn_combo_scaffold_23_131
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163402..164187)
DNA (786bp) protein (262aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLQ2_9BURK
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EGJ09270.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 =
cn_combo_scaffold_23_132
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164241..165851)
DNA (1611bp) protein (537aa)
carboxyl transferase (EC:6.4.1.3)
Propionyl-CoA carboxylase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLQ0_9BURK
Propionyl-CoA carboxylase {ECO:0000313|EMBL:EGJ09268.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATC
cn_combo_scaffold_23_133
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166157..169339
DNA (3183bp) protein (1061aa)
Histidine kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYH1_9GAMM
Histidine kinase {ECO:0000313|EMBL:EIL92262.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus J
histidine kinase
cn_combo_scaffold_23_134
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169376..171349)
DNA (1974bp) protein (658aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3) Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH6_ALIDB
cn_combo_scaffold_23_135
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171346..172833)
DNA (1488bp) protein (496aa)
Putative cytochrome c oxidase, subunit I n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFY8_ALIDK
cytochrome c oxidase, subunit i Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cytochrome c oxidase subunit I
cn_combo_scaffold_23_136
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172830..173381)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH4_ALIDB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_23_137
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173350..174915)
DNA (1566bp) protein (522aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFZ0_ALIDK
methyl-viologen-reducing hydrogenase delta subunit Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
methyl-viologen-reducing hydrogenase subunit delta
cn_combo_scaffold_23_138
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174876..175799)
DNA (924bp) protein (308aa)
Redoxin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH2_ALIDB
electron transport protein SCO1/SenC; K07152 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_23_139
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175783..176712)
DNA (930bp) protein (310aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=12553492 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protoheme IX farnesyltransferase
cn_combo_scaffold_23_140
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176759..178456)
DNA (1698bp) protein (566aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH0_ALIDB
cn_combo_scaffold_23_141
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178467..179006)
DNA (540bp) protein (180aa)
cytochrome c oxidase subunit ii; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cytochrome c oxidase subunit ii; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=12553494 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Cytochrome c oxidase chain II (EC:1.9.3.1)
cn_combo_scaffold_23_142
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179031..179192)
DNA (162bp) protein (54aa)
hypothetical protein id=12553495 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
cn_combo_scaffold_23_143
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179479..180408
DNA (930bp) protein (310aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 id=12553496 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome oxidase assembly
cn_combo_scaffold_23_144
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180365..181630)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035C9D51
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:EWS53849.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
cytochrome AA3 controlling protein, membrane protein-like protein
cn_combo_scaffold_23_145
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181660..182922
DNA (1263bp) protein (421aa)
UPI0003A77268 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A77268
Beta-lactamase {ECO:0000313|EMBL:GAD24073.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
beta-lactamase
cn_combo_scaffold_23_146
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183062..183775
DNA (714bp) protein (238aa)
cAMP-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUA5_9BURK
cAMP-binding protein {ECO:0000313|EMBL:EHR69561.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Crp/FNR family transcriptional regulator
cn_combo_scaffold_23_147
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183654..184550)
DNA (897bp) protein (299aa)
Cytochrome d1 heme region n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6S7_ACIDE
Cytochrome Cbb3 {ECO:0000313|EMBL:KJA08980.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
nirN; heme d1 biosynthesis protein NirN
cn_combo_scaffold_23_148

Not on your lists

comp(184679..186418)
DNA (1740bp) protein (580aa)
hydroxylamine reductase (EC:1.7.99.1)
Uncharacterized protein n=2 Tax=Bacteria RepID=K2CVV9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97125.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NirS. Rose Kantor (10/8/14)
cn_combo_scaffold_23_149
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186623..188557
DNA (1935bp) protein (645aa)
Outer membrane receptor for ferrienterochelin and colicin n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUA7_9BURK
Outer membrane receptor for ferrienterochelin and colicin {ECO:0000313|EMBL:EHR69563.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" sourc
tonb-dependent receptor plug
cn_combo_scaffold_23_150
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188591..189121
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGG1_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94650.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
Displaying items 121-150 of 292 in total

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