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cn_combo_scaffold_32_32

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(24277..26454)

Top 3 Functional Annotations

Value Algorithm Source
rluB; ribosomal large subunit pseudouridine synthase B RluB (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 724.0
  • Bit_score: 713
  • Evalue 4.60e-203
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 724.0
  • Bit_score: 713
  • Evalue 2.30e-202
Pseudouridine synthase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSW3_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 724.0
  • Bit_score: 713
  • Evalue 1.60e-202

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2178
ATGAACGTCCACGAGCCCCAAGAACCGGCACTCGACGCGGCCGAGGCCGCACCCGCAGGCGACGCCGGCAATGCGGCGCCGACCAAACCACGGCGTCGGCGCACGGTCGCCCAGGCCCAAGCCATGCCGCAAGCGCAGCCCGCAGAGTCGGACGCCCCGGTCGATCCGGCGCTGCCGGCCGTCGAGCTCGCCGCGCCCAAGCCGGTGCGCGCGCGCCGGCCGCGCAAGCCGGCGGCGAGCGAACTGGCGGCGATGCCCGAGGCTTCCCCACCCGTGACGCTGGCTGTCGCCGGCGCGTCCGGCGAGCGCCACGAGGGTGATCGCCATACGGACCGCGATGCCGCGCGCCCGGGCGACCGCCCCGGCGAGGCGGATCGCGGCTCCGATCGCGAACGCCAGGGCGAGGACGGCGGCGCCGGCGATGGCGACGAGCCGCGTACCGCGGCGGCGCCGGATGCGTCCGGCGCCGACGAAGGCCCAAGCGCGAACGCGGACGCGCCGCGCCCGAGCAGCCGGCGCAAGCGGCGTCGCAACCGACGCGACCGCGCCGAGCGTGAACCGCGTGCCGCGCGTGCCGACGCCAGCGGCGATGAGCAAGGGACAGACGCCTTTTCGGGCGAGGATGGCGAGGCGCGGGACGAGGGTGCGCGGCAGGCGCTGCCGGCCCTGCCGGCCCTGCCGGTGACCGATCCGGGCGAACTCTTCGCCCAGGTCCTCTCGGGGGCGTTCGACACCGAAGCCCCGGCCGAGGAAGGGCCGGTGGACCCGGCCGAGGCCCCGCGCCGGGTGCTGGCGCCCGAGCCCGATGCCCCCAAGCTCCACAAGGTGCTCGCGCAGGCCGGGATCGGCTCACGCCGCGACATGGAGCAATGGGTGCTCGAAGGTCGCGTCACGGTCAACGGCGAGCCGGCCCACACGGGGCAGCGCATCTCCTTCGGCGACCGCGTGGCCGTCAACGGCAAGCCGGTCAAGCTGCGTATCGCACCGCCGCCGCCGCGCGTGCTCGCCTATCACAAGCCGGCCGGCGAGGTCGTCACGCACGACGATCCGCAGCATCGCCCGACGGTGTTCCGTCGCCTGCCGCGGCTGCCGCACGGCAAGTGGCAATCGGTCGGGCGGCTGGACATCAACACCGAGGGCCTGCTGCTGTTCACCAACTCCGGCGAACTGGCCAACCAGCTCATGCATCCGCGCTTTGGCGTCGAGCGCGAGTACGCGGTGCGCTCGCTGGGGGTGCTGGAGGACGAGCAGCGCCAGCGCCTGCTGGAGGGCGTCGAGATCGACGGCCAGCGCGCGGCCTTCGTGTCGATCGAGGACGGCGGCGGCGAGGGCGTCAACCGTTGGTACCGCGTCGTCATCACCGAGGGTCGCAATCGCGAGGTGCGCCGGCTCTTCGATGCCGTGGGGCACGCGGTGAGCCGCCTGATCCGCATCCGCTACGGCTGCGTCGTGCTGCCGCGCGGCCTCAAGCGCGGCCACTGGGTCGACCTGCCCGAACCCGACGTCAAGGCCTTGCGCCGGCTCACCGGGACCGAGCGGCCGCGCGCCGATGCCCGCGCAGCCGACGAGGGCGGCGGGCGTGACCGTCGCGGGCGCCGGGGCGGCCGCGCGCGCGACGCGCGGCGCGAACCCATGCCCGACGGCCGGCGCGAGCGCGCGCCGCGCCCCGAAGGCGATGACGACGGCCCGATGAACATTCCCAATCCGCTGCAGCAGACCTACGACAAGCGCTTCATCCAGCAGGCGCGTCGGCAGCCGCGCGAGTACAGCGAGGACGGCCCGATCCCCAATCCGCTGCAGCAGACCTACGACAAGCGCGCGCTGCAACGCGAACGGTCACCCCAGCGCGAGTACAGCGAGGACGGCCCGATCCCCAACCCGCTGCAGCAGACCTACGACAAGCGCTTCGTGCAGAAGGGCGCGTCGGGCGGGTCCGGTGCGGCGGGCGGCGGCGGTCGCGGCGCGCGCACCGGGGCGCGCGGCCCCGGTGGACGTCAGCCCGATCCGATGCAGACGACGATGGGCTACCTGGGCGCCAACGCCCTGCGCGGCAAGGGCGGCAAGAATGCCAAGGCGGGCAAGGGCGGCAAGGGCGGCAAGAGCAGCCGGGGCGCAGCGGGCGGCCCGCGCGGCGGTGGCGCCAAGCGTGGCGGACGGGGCGGCAACCGGGGGGCTTGA
PROTEIN sequence
Length: 726
MNVHEPQEPALDAAEAAPAGDAGNAAPTKPRRRRTVAQAQAMPQAQPAESDAPVDPALPAVELAAPKPVRARRPRKPAASELAAMPEASPPVTLAVAGASGERHEGDRHTDRDAARPGDRPGEADRGSDRERQGEDGGAGDGDEPRTAAAPDASGADEGPSANADAPRPSSRRKRRRNRRDRAEREPRAARADASGDEQGTDAFSGEDGEARDEGARQALPALPALPVTDPGELFAQVLSGAFDTEAPAEEGPVDPAEAPRRVLAPEPDAPKLHKVLAQAGIGSRRDMEQWVLEGRVTVNGEPAHTGQRISFGDRVAVNGKPVKLRIAPPPPRVLAYHKPAGEVVTHDDPQHRPTVFRRLPRLPHGKWQSVGRLDINTEGLLLFTNSGELANQLMHPRFGVEREYAVRSLGVLEDEQRQRLLEGVEIDGQRAAFVSIEDGGGEGVNRWYRVVITEGRNREVRRLFDAVGHAVSRLIRIRYGCVVLPRGLKRGHWVDLPEPDVKALRRLTGTERPRADARAADEGGGRDRRGRRGGRARDARREPMPDGRRERAPRPEGDDDGPMNIPNPLQQTYDKRFIQQARRQPREYSEDGPIPNPLQQTYDKRALQRERSPQREYSEDGPIPNPLQQTYDKRFVQKGASGGSGAAGGGGRGARTGARGPGGRQPDPMQTTMGYLGANALRGKGGKNAKAGKGGKGGKSSRGAAGGPRGGGAKRGGRGGNRGA*