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cn_combo_scaffold_32_92

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 93636..94124

Top 3 Functional Annotations

Value Algorithm Source
cbbS; ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_2 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 161.0
  • Bit_score: 241
  • Evalue 7.50e-61
cbbS; ribulose 1,5-bisphosphate carboxylase small subunit (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 161.0
  • Bit_score: 240
  • Evalue 4.40e-61
Ribulose-bisphosphate carboxylase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVL2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 161.0
  • Bit_score: 241
  • Evalue 7.00e-61

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Notes

Small subunit. Rose Kantor (6/30/14)

Taxonomy

R_Burkholderiales_69_20 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGATGACCAACCCCACCGGCCGCCTGACGCAGGGCCAGTTCAGCTTTCTGCCCGAGCTCACCGACGCCGAGATCGCGCTGCAGGTCGACTACGGCCTGGGCAAGGGCTACGCCTGGAGCGTGGAGTACAGCGATGACCCGCACCCGCGCAACACCTACTGGGAGATGTACGGCATGCCGATGTTCGACATTCGCGTGCCCCTCCCCGAGGGGGCTGATCCGGCTCGGGAACGGCCCGTCGCCGGCTCCGACGCCGCCGTCGTGCTGGCCGCCCTGAACGAGTGCCGCCGCACCTTCCCGAACCACTACATCCGCTTGATGGCCTTCGACAGCACGCGCGGCGTGGAGTCGATCGCGATGAGCTTCATCGTCAACCGCCCGGCCAGGGAGCCCGGCTTCGGCCTTGCGCGCCAGGAGGCGGCGGGGCGAACGATGCGCTACACGGTGGTGAGCTACGCCACCGCCCGGCCCGAAGGCGAGCGCGACTAG
PROTEIN sequence
Length: 163
MMTNPTGRLTQGQFSFLPELTDAEIALQVDYGLGKGYAWSVEYSDDPHPRNTYWEMYGMPMFDIRVPLPEGADPARERPVAGSDAAVVLAALNECRRTFPNHYIRLMAFDSTRGVESIAMSFIVNRPAREPGFGLARQEAAGRTMRYTVVSYATARPEGERD*