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cn_combo_scaffold_76_54

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 58513..59136

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 212.0
  • Bit_score: 225
  • Evalue 9.20e-56
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=1271052 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 210.0
  • Bit_score: 222
  • Evalue 4.30e-55
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 211.0
  • Bit_score: 217
  • Evalue 5.10e-54

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Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGACGCGCGTGTACCTTCTCGATGACCATGCCCTCGTACGCGAGGGCCTGCGCGCGGTGCTGGAGTCCGCCGGCATGGTGGTGGTGGGCGAATCGGGCGAGGTCGGCCCGGCCCTCGCGGAGATCGTCGCGCGCGTGCCGGACGTCGTGCTGCTGGACCTGAGCCTGCCCGATCGCTCGGGCCTGGATCTGCTGGCGCAGCTGGGCGATCGCGGCCTGCCGACGCGGATCCTGGTGCTCACCGCCTCCGAGCGGCCGCGGCACGTGGCCGAGGCCGTGCGGCTGGGGGCGGCCGGCTACCTGCTCAAGGGCGCTCCGGCCGAGGAGGTGGTGAAGGCGATCCGCGAGGTGCTCGGGGGCCGGCGGCACTTCGGCGAAGGCGTGGCCGAAGGCGCGACCGAGAGCGGCGACCCGATCGCCACGCTCTCGGCGCGGGAGCGGCAGATCATGCGCATGGTGGTGGCCGGCATGTCGAGTGCGGCCATCGCGCTCGAGTTGCACCTCTCGCCGAAGACCGTCGACACCTATCGCAGCCGGCTCATGGCCAAGCTCGGCGTGCACGACCTTGCCAACCTCGTGCGCGTGGCCGTGCGCCTGGGCGTGATCGACGCCGACAAGCTCTGA
PROTEIN sequence
Length: 208
MTRVYLLDDHALVREGLRAVLESAGMVVVGESGEVGPALAEIVARVPDVVLLDLSLPDRSGLDLLAQLGDRGLPTRILVLTASERPRHVAEAVRLGAAGYLLKGAPAEEVVKAIREVLGGRRHFGEGVAEGATESGDPIATLSARERQIMRMVVAGMSSAAIALELHLSPKTVDTYRSRLMAKLGVHDLANLVRVAVRLGVIDADKL*