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cn_combo_scaffold_122_56

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(57340..57831)

Top 3 Functional Annotations

Value Algorithm Source
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 158.0
  • Bit_score: 138
  • Evalue 1.20e-29
Putative TRAP-type C4-dicarboxylate transport system, small permease component id=4192681 bin=GWF2_Methylomirabilis_70_14 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 158.0
  • Bit_score: 134
  • Evalue 1.20e-28
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 146.0
  • Bit_score: 109
  • Evalue 6.90e-22

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCGCGGCGGCTATGCCCGGCTGCTCGACCTGCTCGGGGTCGGTGCCGGCATCGTGTTCGGCGTGATCGCCCTGGCGACCAGCTGGGACGTGCTGCTTCGCAGCGTCGCCGGCAGCACGATCAACGGCCTGGCGGAGATGGTCGAGTACGCCCTCTTCGGCGCCACCTTTCTCGCCGCGCCGTGGCTGTTGCGCGAGAACGGCCACGTCCAGGTCGACTTCCTCGTCACGGCGCTGCCGCCGCGCATCGGCGCCGCCGTCCGGCGCTTCGGCGACGCCGTCGGCCTGCTCGTGTGCACCGTCCTGTTCGTCTACGCGGTGCGCGTGACCTGGGGCGCCTTCAAGGCCGGCAACATCGTGCTCAAGACGATGATCTTCCCGGAGTGGTGGCTGTATGCGGTGATTGCCGCCTCCATGGCCTTGCTGGCGCTCGAGTTCGCGCGCCGCCTGGCGCTCGGTCAGGCCGCGCCCACGGCGCCGCCCGAGCTGTGA
PROTEIN sequence
Length: 164
MRGGYARLLDLLGVGAGIVFGVIALATSWDVLLRSVAGSTINGLAEMVEYALFGATFLAAPWLLRENGHVQVDFLVTALPPRIGAAVRRFGDAVGLLVCTVLFVYAVRVTWGAFKAGNIVLKTMIFPEWWLYAVIAASMALLALEFARRLALGQAAPTAPPEL*