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cn_combo_scaffold_122_151

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(159504..159965)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein major pilin PilA n=2 Tax=Acidovorax citrulli RepID=A1TW76_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 157.0
  • Bit_score: 180
  • Evalue 1.10e-42
Pilin {ECO:0000313|EMBL:AKH20524.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 157.0
  • Bit_score: 194
  • Evalue 1.30e-46
Tfp pilus assembly protein major pilin PilA similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 157.0
  • Bit_score: 180
  • Evalue 3.00e-43

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Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGAAGCGCGTTCAACAAGGTTTCACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGGCATCCTGGCAGCGGTCGCGCTGCCGGCGTACAAGGATTACACGCTCAAGGCCAAGGTCACGGAAGTGATTCTCGCTTCGAGCCAGTGCCGCACCACGGTCGCCGAGGTCTATCAAACGGCGCCTGCTGGTGCGGTCTTCGCCGTCGACGGCTGGGGCTGCGGCGAAGGCACTACGTCCACCAAGTACGTCTCAGATGTTTCGACGAGCGCCGACGGCGTGATCACGGTCACGGCCCAAGGCACTGGCGAGGGCGATATTGACGGCAAGACCATCACGCTGACGCCGCAAACCTCCGCGGGTGTCGCGCTGACCGCGGCCGCCATTCCGACGCAGGTGGGCACCTTCAAGTGCGCGGCCGGCACGATGGCGCCCAAGTACCTGCCGGGTTCGTGCAAGTAA
PROTEIN sequence
Length: 154
MKRVQQGFTLIELMIVVAIIGILAAVALPAYKDYTLKAKVTEVILASSQCRTTVAEVYQTAPAGAVFAVDGWGCGEGTTSTKYVSDVSTSADGVITVTAQGTGEGDIDGKTITLTPQTSAGVALTAAAIPTQVGTFKCAAGTMAPKYLPGSCK*