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cn_combo_scaffold_1447_17

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 14457..15836

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX37_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 455.0
  • Bit_score: 780
  • Evalue 9.00e-223
ffh; signal recognition particle subunit FFH/SRP54 similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 455.0
  • Bit_score: 780
  • Evalue 2.50e-223
  • rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 455.0
  • Bit_score: 780
  • Evalue 1.30e-222

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGCCTCGACCCTATCCGACCGACTCTCGCGGCTGGTCAAGACGATGCGCGGTCAGGCGCGCATCACCGAAGGCAACGTCCAGGACATGCTGCGCGAGGTGCGCATGGCCCTGCTCGAGGCCGACGTCGCCCTGCCCGTGGTGCGGGACTTCGTCGCCCGCGTCAAGGAGAAGGCGCTCGGGCAGGAGGTCACGGGCTCGCTCAACCCGGGCCAGGCGCTGGTCGGCATCGTGCACAAGGAACTCGCCGCGACCATGGGCGAAGGCGTGGCCGATCTCGACCTCGCGACGCAGCCGCCGGCGGTGATCCTGATGGCCGGCCTGCAGGGGTCGGGCAAGACGACCTCGACGGCGAAGATCGCGCACCATCTCATCCAGAGGCGCAAGAAGAAGGTGCTGACCGTTTCCGCCGACGTCTACCGGCCGGCGGCGATCGAGCAGTTGAAGACGGTGAGCGCGCAGGCCGGCGCGCAGTGGTTCCCCTCGACGCCGGAGCAGAAGCCGCGCGAGATCGCGCTGGCGGCCCTCGACCACGCAAGGCGCCACTACTTCGACGTCCTCATCGTCGACACCGCCGGGCGCCTGGGCATCGACGAGGCTCTGATGGCCGAGATCCGCGAGCTGCACGCTGCGCTCTCGCCGGTGGAGACGCTGTTCGTCGTCGACGCCATGCAGGGCCAGGACGCCGTCAACACCGCCCGCGCCTTCAAGGAGGCACTGCCGCTCACCGGCGTCGTGCTGACCAAGCTCGACGGCGACGCGCGCGGCGGCGCCGCGCTGTCGGTGCGCCAGGTCACCGGGGCGCCGATCAAGTTCGCGGGCGTGTCCGAAAAGATCGACGGCCTCGAGGTCTTCGACGCCGAGCGCCACGCCGGGCGCGTGCTCGGCATGGGCGACATCGTGGCGCTCGTCGAGGAGGTGCAGAAGGGCGTCGACCTGAAGGCCGCGCAGCAGCTTGCCGAGAAAGTGAAGAGCGGCGGCTTCGACCTCGAGGACTTCCTGCTGCAGATCTCCCAGATGAAGAAGATGGGCGGTCTCTCCGGACTCGTCGACAAACTGCCCTCGCAGCTGGCCTCGAAGGCCCAGGGCGCGGACATGGACCGCGCCGAGCGCGACGTGCGGCGCATGGAGGGCATCATCCGCTCGATGACGCCGCTCGAGCGGCGCAAGCCCGAGCTCATCAAGGCCTCGCGCAAGCGTCGCATCGCCAGCGGCGCCGGGGTGCAGGTCCAGGAGGTCAACCGCCTGCTGAACCAGTTCGGCCAGATGCAGGGGATGATGAAGAAGATGAAGGGCGGCGGCCTGATGAAGATGATGCGCCGCATGGGCGGACTCGGCGGCCTGGGCGGAGGCGGTTTTCCGGGCATGCCGCCGCGCTGA
PROTEIN sequence
Length: 460
MASTLSDRLSRLVKTMRGQARITEGNVQDMLREVRMALLEADVALPVVRDFVARVKEKALGQEVTGSLNPGQALVGIVHKELAATMGEGVADLDLATQPPAVILMAGLQGSGKTTSTAKIAHHLIQRRKKKVLTVSADVYRPAAIEQLKTVSAQAGAQWFPSTPEQKPREIALAALDHARRHYFDVLIVDTAGRLGIDEALMAEIRELHAALSPVETLFVVDAMQGQDAVNTARAFKEALPLTGVVLTKLDGDARGGAALSVRQVTGAPIKFAGVSEKIDGLEVFDAERHAGRVLGMGDIVALVEEVQKGVDLKAAQQLAEKVKSGGFDLEDFLLQISQMKKMGGLSGLVDKLPSQLASKAQGADMDRAERDVRRMEGIIRSMTPLERRKPELIKASRKRRIASGAGVQVQEVNRLLNQFGQMQGMMKKMKGGGLMKMMRRMGGLGGLGGGGFPGMPPR*