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cn_combo_scaffold_1460_25

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 26532..28118

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN16_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 513.0
  • Bit_score: 711
  • Evalue 7.70e-202
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:EGJ09734.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 513.0
  • Bit_score: 711
  • Evalue 1.10e-201
polysaccharide chain length determinant protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 525.0
  • Bit_score: 692
  • Evalue 8.00e-197

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
ATGGAAGAACTGATCCGCCAGGCGCAGTCGATCCTGCGCGGCATGTGGCGCTACCGCTGGCAGGCACTGCTCACCTCCTGGGTGGTGGCCATCGTCGGCGTCGTCGTGGTCTTCAAGATCCCAGACGAGTACGAGGCCTCGGCGCGCATCTACGTCGACACGCAGTCGATCCTCAAGCCGCTGATGGCCGGGCTCACCGTGCAGCCCAACGTGGAGCAGCAGATCCAGATGCTCAGCCGCACGCTGATCAGCCGCCCCAACGTCGAGAAGCTCATCCGCATGGCCGACCTCGACCTGAAGACCGCCTCCAAGCTCGAGCAGGAGGCGCTGGTCGAGCGGCTGACCAAGGAGATCCAGATCCGCAACACCGGACGCGACAACCTCTACTCGCTCGCCTTCAAGGATTCCGACCAGGAAAAGGCCAAGCGCGTGATCCAGTCGCTGGTGTCGATCTTCGTCGAGAGCAGCCTGGGCGCCAGCCGCAAGGACACCGATTCGGCCAAGACCTTCCTCAACGAGCAGATCAAGCAGTACGAGGCCAAGCTCGAGGAAGCGGAGGCCCGCATGAAGGACTTCCGCGTGCGCAACCTCGACCTGCAGGGCGCGGACGGCAAGGACGCCACGACCCGCGTGGCCGAGATGGCCAAGATGCTCGGCCAGGCGCGGCTCGAGCTGCGCGAGGCCGAGAACGCGCGTGACTCGGCCCGGGCCCAGCTCGCCGCGGAACGGGGACAGGGCGCGAGCCTGGCCACGCAAAGCCTGTTGCAGGAGTCGTCGATTTCCGTCGCCACGCCGGAGATCGACGCCCGCATCGATGCCCTCAAGCGCAACCTCGACGGCCTGCTGCAGCGCTATACGGAACAGCATCCGGACATCATGGCCACACGGCGGCTGCTCAAGGATCTGGAGGAGCAGAAGCGCAAGGAAGTCGCCGAGCTGCGCAAGGCGGCGCTGGCCAACGCCGCCGTCACCGGTTCGCAGACGCAGAACGCGAGCCTCGCGGCGCAGGAGCTGAACCGGATGCTGGCGGCATCCGAGGTGCAGGTGGCGGCCTTGAAGGCGCGCGTGGCCGAATTCACGACGCGCTACAACGCCGCCCATGCGGCGCTGAAGACTGCGCCGCAGATCGAGGCCGAGGCCGCCCAGCTCAACCGCGACTACGCGGTGGTGAAGAAGAACTACGAGGACCTGGTGGCCCGCCGGGCCTCGGCGGTGATGTCCGGCGAACTCGACGTCGCCTCGGGCGTGGCCGACTTCCGGCTCATCGACCCGCCGCGCGTCAGTCCGAAGCCCGTCTGGCCCAACCGGCTGCTGCTGCTGCCGCTGGCCCTTGCCGCCGCGGTCCTGGCCGGGCTGGCCGCGGCCTTCGTCGCCAGCCAGCTGCGCCCGGTGTTCAACGATGCGCAGGACATGCGGCTGAAGACCTCGCTGCCGATCCTTGGCGTCGTCTCGATGGCCCTGGGCGACGACGAGCGGCGCGCCGAGCGCCGCAACCTGGTGCAGTTCTACGGCGCCTCGGCCGGGCTGGTGGGTCTGTTCATCGTCGGCCTGGTCGCCATGGCCTTCATCTCTCGGACCTTGGGGTGA
PROTEIN sequence
Length: 529
MEELIRQAQSILRGMWRYRWQALLTSWVVAIVGVVVVFKIPDEYEASARIYVDTQSILKPLMAGLTVQPNVEQQIQMLSRTLISRPNVEKLIRMADLDLKTASKLEQEALVERLTKEIQIRNTGRDNLYSLAFKDSDQEKAKRVIQSLVSIFVESSLGASRKDTDSAKTFLNEQIKQYEAKLEEAEARMKDFRVRNLDLQGADGKDATTRVAEMAKMLGQARLELREAENARDSARAQLAAERGQGASLATQSLLQESSISVATPEIDARIDALKRNLDGLLQRYTEQHPDIMATRRLLKDLEEQKRKEVAELRKAALANAAVTGSQTQNASLAAQELNRMLAASEVQVAALKARVAEFTTRYNAAHAALKTAPQIEAEAAQLNRDYAVVKKNYEDLVARRASAVMSGELDVASGVADFRLIDPPRVSPKPVWPNRLLLLPLALAAAVLAGLAAAFVASQLRPVFNDAQDMRLKTSLPILGVVSMALGDDERRAERRNLVQFYGASAGLVGLFIVGLVAMAFISRTLG*