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cn_combo_scaffold_4999_11

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 10730..11587

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 274.0
  • Bit_score: 374
  • Evalue 1.70e-100
aroE; shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 274.0
  • Bit_score: 369
  • Evalue 6.40e-100
Shikimate dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 274.0
  • Bit_score: 374
  • Evalue 1.20e-100

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAACGCGCCCGACCCGCGGCGGCCCGCACGCTATTCGGTCATCGGCCATCCGGTGGCGCACAGCCAGTCGCCGTTCATTCACGCGCAGTTCGCGCAGCAGACCGGGCAAGACATCGCGTACGGCCGCATCGACTGCGGGGCGCAGGGCTTCGAGGCCGCGGTGCGCGCGTTCGCCGCCGACGGCGCCGCAGGCTGCAACGTCACCGTACCCTTCAAGTTCGACGCCGCGGCGCTGGCTGCGGTGTGCACCGAGCGCGCACGGCTGGCAGGCGCGGCCAACACGCTGCGCTTCGATGCCGACGGCTGGCTGGCCGACAACACCGATGGCATCGGCCTGCTGCGCGACATCGAGTTCAACGCCGGCTTCGCGCTCGCCGGGCGCCGCGTGCTGCTGGTCGGGGCCGGCGGCGCAGGCGCGGGCGTGCTCGGGCCGCTGCTCGGCGCGGGCCCGCGCGAGCTGACCCTCGTCAACCGCACGCCCGAACGCGCGCAGGCGCTGGTGGCGCGCCACGCGCCGCTGGCGCGCGAGGCCGGCGTCGCGTTGCGGGCGGCGGCGCTGCAGGCGCCCGGCCGCGCCTTCGACCTCGTCATCAACGCCAGCGCGAGCAGCCTGCAGGGCGCCTCGGTGCCGGTTCCCGACGACGCGCTCTCCGGCGCGGGCCTGGCGATCGATCTCATGTACGGCGCCGCGGCGCAAGGCTTCCTCGACTGGGCCGCGCGCCGGGGCGCGCGGGCGCGCGACGGCCTGGGCATGCTGGTGGAACAGGCGGCCGAGGCCTTCTTCGTCTGGCGCGGCGTGCGCCCGGACGGCGCGCCGGTGCTGCAGGCGCTGCGCGCGCGTCTGGCGTGCGCATGA
PROTEIN sequence
Length: 286
MNAPDPRRPARYSVIGHPVAHSQSPFIHAQFAQQTGQDIAYGRIDCGAQGFEAAVRAFAADGAAGCNVTVPFKFDAAALAAVCTERARLAGAANTLRFDADGWLADNTDGIGLLRDIEFNAGFALAGRRVLLVGAGGAGAGVLGPLLGAGPRELTLVNRTPERAQALVARHAPLAREAGVALRAAALQAPGRAFDLVINASASSLQGASVPVPDDALSGAGLAIDLMYGAAAQGFLDWAARRGARARDGLGMLVEQAAEAFFVWRGVRPDGAPVLQALRARLACA*