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cn_combo_scaffold_1274_13

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 9908..10741

Top 3 Functional Annotations

Value Algorithm Source
mutM; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase MutM (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 276.0
  • Bit_score: 365
  • Evalue 1.20e-98
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 276.0
  • Bit_score: 365
  • Evalue 5.90e-98
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMH9_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 276.0
  • Bit_score: 365
  • Evalue 4.20e-98

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCCCGAGCTCCCCGAAGTCGAGGTCACGCGGCGCAGCATCGACCTGCCGCTACGGGGAGCGCAGGTGCAGGCCGTGCGGCTGGGCAAGCCGCTGCGCTGGCCCCTCGGGCGCGACCCGCAGGCGCTGGTGGGCCTGCGCCTGGGGGCCGTGCAGCGACGCGGCAAGTACCTCTGGTTGCCGCTGCAGGGCGCGCCCGAACTGCCTGAGCAAGGGCTTTTGATCCACCTCGGCATGTCCGGTTCACTGCGGCTGCTGGCGCCGGCCGAACCGGCGCGCGCACACGAGCATTTCCGTCTCGACACCGACCGCGGCAGCCTGCGGCTGACCGACCCGCGGCGCTTCGGCGCCGTCGTCTGGTCGGCGGCGCGGGACCAGGATCCAGCCGCCCGGCTGCTCGGCGGCCTGGGCTTCGAGCCCTTCGACCCCGCACTCGACGACGAGAGCTTTCACGCCGCATTGCGCCTGCGTCGCGCGCCGATCAAGACGGTGCTGCTGGGCGGCCAGGTCATCGTCGGCGCGGGCAACATCTACGCCTGCGAGGCGCTGTTTCACGCCGGCATCGACCCGCGCTGCAGCGCCGCGCGCCTCGGCCGCGCCCGCGCGGCGCGTCTGCTGCAGGCGCTGCGCCAGACCCTGGGGCAGGCGATGGCGCTCGGCGGCTCGACGCTGCGCGACTTCCGCGACGCGCACGGCGTGAACGGCGCCTTCCAGCAGCAGGCGGCGGTCTACGGCCGCGAGGGCCAGCCTTGCACCGCCTGCGGCAAGCCGCTGCGGCGCATCGTGCAGGCGCAGCGCTCGACCTACTTCTGCCCGCGTTGCCAGCGTCGCTGA
PROTEIN sequence
Length: 278
MPELPEVEVTRRSIDLPLRGAQVQAVRLGKPLRWPLGRDPQALVGLRLGAVQRRGKYLWLPLQGAPELPEQGLLIHLGMSGSLRLLAPAEPARAHEHFRLDTDRGSLRLTDPRRFGAVVWSAARDQDPAARLLGGLGFEPFDPALDDESFHAALRLRRAPIKTVLLGGQVIVGAGNIYACEALFHAGIDPRCSAARLGRARAARLLQALRQTLGQAMALGGSTLRDFRDAHGVNGAFQQQAAVYGREGQPCTACGKPLRRIVQAQRSTYFCPRCQRR*