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cn_combo_scaffold_1274_28

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(27018..27728)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2TGP8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 235.0
  • Bit_score: 320
  • Evalue 1.30e-84
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL77607.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 235.0
  • Bit_score: 320
  • Evalue 1.80e-84
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 235.0
  • Bit_score: 319
  • Evalue 1.10e-84

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGTCTGAGCCGCTGCTCGAGGTCGAAGGCCTGAGCTGCGGCTGGGGCGACGCCGTGGTGCTCAGCGACGTCAGCTTCGCGCTGCCCGCGGGCCGCTCGCTGGCGCTGCTGGGCCGCAACGGCACCGGCAAGACGACCTTGCTGGAGACGCTCGTCGGCGTCACGCGGCGCTACGCCGGCAGCCTGCGCCTGGGCGGCCGGCCGATCCACACGCTGGCGGTGCACCAGCGCGCCGAAGCCGGCATCGGCTGGGTGCCGCAGGAGCGCAACATCTTCAAGTCCCTGACGGTCGAGGAGAACCTGAGCGCCGTCGCGCGCCCCGGGCCCTGGAGCCCGCAGCGCGTGTTCGAGCTCTTCCCGCGTCTGCAGGAGCGCCGGCGCAACCTGGGCACCGCCTTGTCCGGCGGCGAGCAGCAGATGCTGGCCTTCGGCCGCGCGCTCGTGCTCAACCCCAGGCTGCTGCTGCTGGATGAACCGCTCGAAGGCCTGGCACCGATCATCGTCGCCGAACTGTTGCAGGCCATTCGCCGCGTCGCGCGCGACGAGGGCCTGCCGTCGATCGTCGTCGAGCAGCACCCGCACATGGCGCTCGGCGTCACCGACGACGCGCTGGTGCTGGACCGCGGCAGCATCGCCTACCGCGCCACGAGCCAGGCGCTGCGCGAGGACCCGACGCCGCTCGACGCCTGGCTGGGGGTGTCCAAGCACTGA
PROTEIN sequence
Length: 237
MSEPLLEVEGLSCGWGDAVVLSDVSFALPAGRSLALLGRNGTGKTTLLETLVGVTRRYAGSLRLGGRPIHTLAVHQRAEAGIGWVPQERNIFKSLTVEENLSAVARPGPWSPQRVFELFPRLQERRRNLGTALSGGEQQMLAFGRALVLNPRLLLLDEPLEGLAPIIVAELLQAIRRVARDEGLPSIVVEQHPHMALGVTDDALVLDRGSIAYRATSQALREDPTPLDAWLGVSKH*