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cn_combo_scaffold_2073_27

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 24861..25643

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXD9_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 261.0
  • Bit_score: 204
  • Evalue 1.50e-49
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 261.0
  • Bit_score: 204
  • Evalue 4.30e-50
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACB33920.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="L similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 261.0
  • Bit_score: 204
  • Evalue 2.10e-49

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GTGACGCTCTCTGCCCTGACCTCAATGCCTCAGCCGCGCGCTCCCAACCGAACGGCACTGGTGGTCATCGCCGATCCCGCAGTGCGCGAGCTCATGGCCGTCAACTTCCGTCACGCCGGGGTCTTCCCGGTGCTGGCGGTCAGCTTCGACGATGGCAGCCGCCTCGCCAGGGAAGTCTTGCCGGATGCCGTGCTGCTGGACCTGGACGCAGTACCACCTGGCACTCCCGCAGATCGTCTGCTTCTCGGATTGAACCCAGGCTTGCCCATCGTCATGCTGACCTCGGATCTCGAGGAGGCCTGCGGCTCTGACGGTCAGCTCTGCCGCGCTTCCGCCTGCATTCGCAAGCCGATCAGTCCACGGCAGCTCGTGGCGGAATTGCTTCAACAACTGCGTGCCGTCCACTCCGGCGCGACGCTATCCAGCGCCCCTGCAGAAGCGCAACGGCATCGTCGCTCGAGGCGCCCACAACCCAGGCGACTGGGTGACCTGGAGCTGGATCCCGAGGGCCACCAGGCATGGCTGCATCGGGACGGGCGTTCCGCGGCGGTTGCACTGGCGCCACGAGAGATTCAATTGCTGTACTGCCTCATGCACCACCCGGACCGCGTGTTGTCGCGCGAGGCCATCCTCAGCGAAGCATGGCGAGGCGAAGACGAGGTCGGCCTTCGAACCGTCGACCAGTACGTCAAGCGTTTACGCAGGCGGCTGGAGGCGATCGGTGGTGCGGACCTCGTACAGACGGTCAAGGGCCATGGCTATCGCTTGCATGTCACTCGATGA
PROTEIN sequence
Length: 261
VTLSALTSMPQPRAPNRTALVVIADPAVRELMAVNFRHAGVFPVLAVSFDDGSRLAREVLPDAVLLDLDAVPPGTPADRLLLGLNPGLPIVMLTSDLEEACGSDGQLCRASACIRKPISPRQLVAELLQQLRAVHSGATLSSAPAEAQRHRRSRRPQPRRLGDLELDPEGHQAWLHRDGRSAAVALAPREIQLLYCLMHHPDRVLSREAILSEAWRGEDEVGLRTVDQYVKRLRRRLEAIGGADLVQTVKGHGYRLHVTR*