ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

cn_combo_scaffold_2801_18

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(12481..12999)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003732600 similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 161.0
  • Bit_score: 328
  • Evalue 4.60e-87
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 172.0
  • Bit_score: 347
  • Evalue 1.30e-92
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 161.0
  • Bit_score: 214
  • Evalue 2.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGATGCCGCACGCGGTTTCCTCGCTTCTCCATATGGAACAGGTGAATACGGAAGACTGTGAAGGTGTGTCAGCAGGCGCGTTTGTATTCCAATCCCGCCCTAACCATTCATTGACACACCGCCAGCAGAAGCTGGTGCTCTGGAGTCTGGCGACAGTATGTTTTGCAACGGCAAGCGGCTTTGCACTCCTGGGATACTGGCTGATCCTGCCATTTGCCGGACTGGAGATAGGATTGCTGGCATGGGCATTGGAGGCGCTGCGCAACCGGGAAGGGGATTACGAAACACTTACGATTGAAGGGGATATGGTAGTGCTGGAGTGGCATGCCGGCACACATGGAGAGCGCCGTGAAATGAATCGCCAATGGGCGCGTGTGATATGCGACTGCGGGACGTCAGGCAGAAACTGCCGTCTCAGCCTGAGTTCTCATGGTCGCGAAACAAAAGTCGGACAGTACCTGAGTGACGAGGCGCGGCTGCAACTAGCTGCGACCTTACGCAGAAAGTTGCAGGCATAA
PROTEIN sequence
Length: 173
MMPHAVSSLLHMEQVNTEDCEGVSAGAFVFQSRPNHSLTHRQQKLVLWSLATVCFATASGFALLGYWLILPFAGLEIGLLAWALEALRNREGDYETLTIEGDMVVLEWHAGTHGERREMNRQWARVICDCGTSGRNCRLSLSSHGRETKVGQYLSDEARLQLAATLRRKLQA*