ggKbase home page

cn_combo_scaffold_3646_5

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: 5119..6858

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein Csd1 family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEZ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 583.0
  • Bit_score: 873
  • Evalue 1.70e-250
CRISPR-associated protein Csd1 family {ECO:0000313|EMBL:EIL98038.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 583.0
  • Bit_score: 873
  • Evalue 2.40e-250
CRISPR-associated protein Csd1 family similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 600.0
  • Bit_score: 601
  • Evalue 2.00e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGATTCTGCAAGCGCTAAATCGTTATTACGAACGTGTGGACAATCTGCCCCGCGAAGGTTGGATCCGCCGTGGTGTTGATTACGTCGTTGTATTGGACGAGCAAGGCGTCTGCGTCAACCTCGAAGCCGTTGGCGAACAAAAGAAAGGCAAGACCGTCCCGCGTGAAATGTTGGTGACCGCCATTGGAAAGCAGGCGATGAAGCACACCAATAGCGGCAAGGATTCCAATCTGCTTTGGGACAACGCCAGCTTTGTTTTCGGAACAGGCAACAAGGGCGAAATGAAGCTGGCCAGCTTCATTGCCACGCTTCAAGAATGGCTCGGCGATATCAACGATGCGGGCGCCAAAGCCGTCCGCCAGTTTGCTATCAATCTCCAAACCCAGCCTGGAGCCGCCGCCGCGCTCGTCGAGCGTTTTCAGGTCAAAGAGGATTTCGAGAAACGCGATCCGGTTCTCATTTTTCGTCTTGTATCGGACATGGAGGGCGTTCATCTGCGTCCTGCTATCCGCAGCACTTACGAAAGCACTTTGGCAACAGCGCACTCAGGTAGTGAACTGCGTGGCAATTGTCTGGTGACCGGTGAAATGGACGTGCCGCTAGCGCCGAATGAATCCGTTATCAAAGGCGTTTGGGGTGGGCAGCCTGCCGGCTGCAATATCGTTTCCTTCAACGCGCGCGCATTCGAGTCCTACGGAAAACGCGAACGCAACGGCGAGAACGCGCCGGTCAGCCTGCGTGCTTCCTTCGCCTACACAACAGCACTCAATCATCTGCTGGCGTCGAAGCAGCGCATTCAGGTCGGCGATACCTCCACGGTTTTCTGGGCCGAGGAGTCGCACGAGCTGGAAAGTTCGATAGTCGATTTGTTCGGCGAGCCGCCCAAGGACAACCCGGACAGGAATACCGATGCGGTAAAGGCACTTTACGCTGCTGTCGAGTCAGGCAAATTCAGCGTCGGCGGGCCGGATACGCGCTTTCATGTACTTGGCCTGGCCCCCAACGCCGCGCGCATCAGCATCCGCTTCTGGGAAACCGCCACCGCTGCCGAACTGGCACTTCGCATCAAACAGCACTTCGACGATCTGGCCGTCGTCCACGCTGACTACGAGCCAGAACACCTTTCTCTGTTCCGCCTGCTCACTGGGCTCGCCTTGCTGAACAAGGCCGACAACATCCCCCCCAATCTGGGTGGCGAGGTCATGCGCACCGTTCTCGAAGGCCTGCCTTACCCGATGGCCATGCTCAATCTGGCCGTGGCACGCTGCCGTGCCGAGCAAAAACCCACCTACGCCCGTGCTGCTGCCATCAAGGCCAGTCTCAACCGCTGGATTCGTTCCCGCAAAACTCAAGAAAAGGAGTTCCTGCCCATGCTTGACCTGTCCAACCTCAACCCGGCTTACCGACTGGGGCGGCTGTTCGCGGCGCTGGAAAAAATCCAGGAAGAAGCCAGCCCCGGACTCAACGCCACCATCCGCGACCGCTATTACGGGGCAGCGTCGAGCACCCCGGTTTCCGTCTTCACCACATTGCTGCGCCTGAAGAATCACCACATCGGCAAGCTGTCGCCCGGTCGCGCCACACAAATGGAAAGGCTGCTCGGCGAAATCCTCGGCGAAGTCGCCGACTTTCCGCGTCAACTCCCCTTGCAGGACCAAGGCCGTTTCGCACTCGGCTACTACCACCAGCGCCAAGCCTTCTTCACCAAATCCATGACCACTCCGGAGGAATCCAAATGA
PROTEIN sequence
Length: 580
MILQALNRYYERVDNLPREGWIRRGVDYVVVLDEQGVCVNLEAVGEQKKGKTVPREMLVTAIGKQAMKHTNSGKDSNLLWDNASFVFGTGNKGEMKLASFIATLQEWLGDINDAGAKAVRQFAINLQTQPGAAAALVERFQVKEDFEKRDPVLIFRLVSDMEGVHLRPAIRSTYESTLATAHSGSELRGNCLVTGEMDVPLAPNESVIKGVWGGQPAGCNIVSFNARAFESYGKRERNGENAPVSLRASFAYTTALNHLLASKQRIQVGDTSTVFWAEESHELESSIVDLFGEPPKDNPDRNTDAVKALYAAVESGKFSVGGPDTRFHVLGLAPNAARISIRFWETATAAELALRIKQHFDDLAVVHADYEPEHLSLFRLLTGLALLNKADNIPPNLGGEVMRTVLEGLPYPMAMLNLAVARCRAEQKPTYARAAAIKASLNRWIRSRKTQEKEFLPMLDLSNLNPAYRLGRLFAALEKIQEEASPGLNATIRDRYYGAASSTPVSVFTTLLRLKNHHIGKLSPGRATQMERLLGEILGEVADFPRQLPLQDQGRFALGYYHQRQAFFTKSMTTPEESK*