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cn_combo_scaffold_4188_7

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(8209..15852)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Conserved repeat domain protein (Fragment) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4I4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 999.99
  • Bit_score: 1534
  • Evalue 0.0
Conserved repeat domain protein {ECO:0000313|EMBL:EEW24067.1}; Flags: Precursor; Fragment;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhod similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 999.99
  • Bit_score: 1534
  • Evalue 0.0
transcriptional regulator, AraC family with Parallel beta-helix repeat similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 999.99
  • Bit_score: 1291
  • Evalue 0.0

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 7644
ATGCGATTCATGACTTTGCCGAGCCTTCGTGCCGTGCGTAGCGGGTGCGTGCGCCTCGTAGCCGCAGCCAGCCTGTTGATGGCCCCTGCCGCCTGGGCCGGCGTGGACTGGGTGGTGAACAACAGCGACACAGGTTTCGACCCGGTGATAGCCGGCGGCAACGTGGTCTACGTGGTCTCTGTCAGCAACAACGGCAACAGCGCCGCAGCATCGACTTCCCTCATCTTGTCGATTCCGGCGACGACGAGCTTTATCAGCGCCACTGGCATGAGTTGCAGTGGCAGCGGCCCGGTAACTTGCACGGTACCGGCACTGAGCGAAGCCGGCGGTGGCAGCGATAGCGCCACGGTGAACGTCACCCTGCGTACCAGCGTGTCGGGTTCGGTGATCCTGGGGGCAAGCGTACCGGCAGCGGGCGACGACGACGTGAACAATAACGTCGATAACGAATCGACCACGGTGAACGCGGGCGCGGACATTGCCTTGAGCCTGGCGGGCCCGGCCAGCGCGCAATCCGGCAGCACGGTGTCGTACACCTTCACGGTGTTGAACAACGGCCCGGACACCTCGCCCGGCCAGACCCTGTCGTTTCCCGTGCCCACCGGCCTCGTCGGGGTGACGCCGCCCGGTGGTTGCACACTGGCGGGTTCAACCTATTCCTGCACGGTGGCGGCGCTGGCCAACGGCGGTTCGACCACGCGGGTGTTCACCGGCCAGATTGCAGCGGCGTCAGGTTCCACGCTCACGCCGGCTGGCAGCATTGCGGCGGCGGGCACGCCTGCCGACCCGGTCAGCACCAACAACACGGCGGTGTTCAACACCACGGTAACGGCCGGCAGCGACGTGCGCCTGACCAAATCGCGTGCGCCTGCGGGCACGCTCATCGTCGGGCAGGCGGTGAATTTCACCCTCACGCCGAGCTACAGCGGCGATTCACCCAACACGCTTACGATCACCGATACCCTGCCCGCCAACTACACGGTGGGTGCCGTGGCCAGCCCGCAGAACGGCTGGACTTGCGGTGTGTCGGGGCAGACCGTCACCTGCACCAAGCCTGCGGGCAGCGGTGCGGGCAACGCTGTGTCGCTAGGCAACGTCGTTATTCCGGCCACCGCAAGCGGCGCGGGTGCAGGCGTCGTCAACACAGCCACGATCAGCGCGGCGGGCCCGTCTGACCCCAACCCGGCCAACAACAGCGCGAGCGACACGGCCGCCACCATTCAGGCCGCCACCGTCGATTTGCGCGCCAACAAGTCTGCACCCAGCCCCGCGCTGGTGGTGACCGGTGTGCCGTACGACTACACGATCAGCGCTACCAATATTGGTACTGCTGCGTTCTTCGGCACGCTGACGATGACCGACAGCCTGCCGGCCGGTGTCACCGCCAACAGCTACACGCTTAACGGCTGGAGCTGCCTGCCTGCTGCACCCGTCGCCGGGCCGGCGAGCATTACCTGCACCCGCGTATACACGGCGGGTGCCCCGCTGGCGGCCAACGCCACTACCCCTGTCGTTACGCTCAACGCCACCGCATCGGGTACCGGCAGCCTTGTGAACAGCATGAGCGTGAGTTCGCCCGATGCGAACCTGCCCGACAACAACCCTGGCAACGACACGACGACTGCGCCGGTGACCAGCAGCGTGCCCGGCGATTCGGCCGATCTGTCGGTACTGAAATCGGTGTCGCCCGGCACTGTGGCGGCTGGCGACGTGCTGACCTACACGCTCGAAATCGTCAACGCGGGCCCGCAGGCTGCCACCACGGTGTCACTGGCCGACAGCCTCACCAGCCTCATCAACAGCAGCACCGGGCCGACCGGCGCGGGTTACGTGGGCGAAAGCCTCAACGCGGGGGTGGCCACGGGGGCAAGCTGCACGTCGTCGGCCAGCGGCGGCACCACGCGCAACCTGAATTGCGCCTTTGCCAGCCTGCCGGTGTGTACCGCCGGCGTCGATTGCCCGGTGGTGACGGTGCAGGTGCGCCCCGGCGGCAACGGCGGCAGCCGCACCAACACCGTCAGCGTGGTGTCGGCCAACACCGCCGATCCGGACGCCGCCGACCGCACCGCGAGCGTGACCAGCACCGTGACCCCGCGTGCAGACGTCACCGTCAGCAAAACCGCCAATCCCGCCTCGGTACCGGCCGGGCAGAACGTCACCTACGTGGTGACGGCGACAAATATCGCCAATGGCTTGTCGGATGCGGGCAACGTCACCGTCACCGACACCCTGCCGGCCAATGTCACGTTCGTGTCCGCCACGCCGTCGGCGGGGTCGTGCAGCACGACACCAACGGCCAACAGTACCACTGGCCCGGGCAACGACCAGATCGTCTGTAACTTCGGCACGATCAACAACGGCGCGCAGCGCACGCTCACCATCGTGGTGCAACCCAACACCGCCACCCGGGGCAGCACGCTGACCAACAACGTGAGCGTGGCCACCAGCACGACAGAAACCGACGCCGGCAACAACAGCGCCAGCGTCAATACTGCGGTGCTGAATCCTGCGCTCGATCTCCTCATCAACAAGACTGACAGCGTTGATCCCGTTGCCGCCGGCGACAACACGGTTTACACCGTCACCGCGCGCAACCAGGGCCCGTCGGTGGCGGAAAACGTGCAGATCACCGAGAGCCTGCCGCCCACCCGCCTGAGCTACCAGTCCCACACCGTGCCGGCGGGCGGCAGTTGCGGCACCGTGCCGGCGGTGAACAGCACCGGCGGCACGCTGGTGTGCCAGGTGCCGCGCCTGGCGTCGGGACAGACGGCGAGTTTCACTGTCACCCTGCGCGGCGAAATCAAGGGCGTGGACACCAACTCGGTGAGCCTCACCTCTGACGAAGCCGCCCTGGGGTTCGACACCAACGCGGCCAACAACACCGTCAACGAAACCACCACGGTGCGCACCAAGGCGGACATGCAGGTGGTGAGCAAGATTGCGTCGGCCAACCCGGTCAACCTGCGTGACGATTTCAATTTTGTCGTCAAGGTGCGCAACAACGTGGGCGCAGGGCTTGCCGAGGCCGACAACGTTGTCGTCTCCGACACGCTGCCCACCAACATGCAGCTGACGGGCACCCCTACGGTGGCCATCATTGCCGGCACCACCACGTCCACCACGTGCAGCGGCAACGCGGGCAGCGTCGCCTTCACCTGTACCCTGGGCACGGTGAGCAGCGGTGGCGAGGTGGACATCACGGTGCCGGTACAGATCGTCGCCGTCAGCAGCACCCCGCAGAATTTCAACAACACGGCCTCGGTGGCGACTTCGTCGCTGGACATCAATGCCGGCAACAACAGCAACAGCGGCAGCGTGTCGGTCAATGCGTCGTCGCTGGCCGGTCGCGTGTTCCGCGATTTCAACAACGATGGTCTGGTCACGGCGGGGGATACCGGCATCGCCGGCATCACGCTGACGCTCACAGGTACGAGCTTTGACGGCGCAGCCATCAGCCGGACCGCCACCACCGACGCCAGCGGCAACTACAGCTTTGCCAATTTGCCCGAAGGTACGTACACCCTCAGCGAAGGTGCGGTCAGCGAAGCGTATCTCGTGGATGGCATCGACACCGCCGGCACGGTGGGCGGCAATGCTTCGGTCAATGATGTGATTTCCGCGATTGCCCTGCCGGCGAACACCGCCGCCACCGGCTACACCTTCGCCGAGGTGCCGCAGGCGCGCATCGGTATCGCCAAGGCCGTGAACGCCGGGCCGACGGTCAATCCGGATGGCAGCTTCAACGTCACCTTCCGCCTGCTGGTCGAAAATTTCAGCCTGGAAGCGCTGAACAGCATCGTCATTACCGACACGCTGGCGGGGGGCACGCCGCGCTTTGGCACGCAGGTTACGCTGGGCAACCCGGCTGCTGACGCGCTCAATCCGGGCGAATACACCCTGCTGGCTGCGCCGGCGGGGTCGTGTTCCGGACTCAATGCCACGTACAACGGCAGTGCCAGCACCACAGTCGCCAGCGGATTTAGCCTCGCCGCCGGGGGAACGTGTACGGTGGACCTGGCGCTGCGCGTGCGGCCGACCAATCCGCTGCCGCCGCTGTTGCCGTCGGGCGGCCGCTACGATAACCAGGCCGTTGTGAATGGCACGGGCGCGTTGTCCGGCCAGACCTCGGCGACCAACCCGCAACTCCAGGATCTGTCGGACAACGGCAGCAACCCCGATCCCGATAACGACAACCAGGCCAACGAGGCCGGCGAAAACGACCCCACACCGGTTCTGCCCGCATTCAACGCGGCTATCGGCATTGCCAAGCGCGTGAACACCCAAGTTTCGGTGCAGCCGGACGGTAGTCTGCTGGTGCCGGTGCGCCTCGTCGTCAGCAACGTCGGCAACGAACCGCTCAATACCGTGTCGGTGACCGATCCGCTCTCCACGGCGGCGGGCGGCCAGTTCGGCGGTTTCGTGCCCGGCGGCGCGGCAGCAGTGCTCGCCAGCGGCCAGTACACCGTGCAAACCGCGCCGGCCTTCTCGGGAGCCTGCGCCAACGGTGCCACCGTGGGCGGGTTCACCGGCCACAGCGGCAATCTCGCCGTGGCGACGATCTCGGCCATGGCACCCGCCGCCGTCTGCACCCTCGATTTCGTCTACCGCTTCAACCCCGGTGCGGCGCTCACCTACACCAATCAGGCGCAGGCCAGCGGCACCGGCGACTACAGCGGCTCACCCGTCAACGACCTGTCGGACGACGGGACAAGCCCCGACCCCAACAGCAACGGCAACGCGGGCGAGGCGGGCGAGAACGATCCCACACCGGTACCGGTGCCGCGCATCGGTCTGGCCAAATCCGCCGGCGCGGTGGTCAATAACGGCGACGGCACCTACACCGTGCCGTTTACCCTGACGGTACGCAACGCCGGCCAGACGCCGCTCGCCAGCGTGCAGGTCAGCGACACGCTGGCCGGTGCCCTGCCGCAGTTCGGCACCTACACCGCCAGCGCGATTCCTGCCGCCGGACACTATACGATCACCAGCGGGCCCACCGTGGGCGCACAAACCAACGGCGCGTCGCTCGCCGCCGTGGCCCCCGGTGTGTTTACCGGCAACGGTTCGGGTACGAACCTGCTGAATCCCGCGTCGAGCAGCCTGCCCAACTTCGGCGCGTCGGCGTCCAGCGCGCAAATCAGCTTCACCGTGCGTTTCTTCCCGACCACCCCCGGCCCGTTTGAAAACAGCGCGGTGTCCACCGCCTCACCGCCCGGCGGCGGCACGGTGCAGGACGACAGTGTGGACGGCAGCAACCCCGACCCCAATGGCAACGGCACGCCCAACGACGACAGCTCACCCACTCCGGTGAGTCTGGCAGCGCAGGCCATCGGCGTGGCCAAGTCGGTATCCGGCATCGTGCAGACCGGCGCGAAGCAGTATCGCGTCCCCTACACGATCATCGTGCGCAACGTCAGCGCCAGCGTAACGGCGACCAATGTGCAGGTGACGGACGATGTGGTGGCCACCTTCCCCACGGCGGTGACGCGGACGATCGCCCCCCCGGTCGCCGTGTCCGCGTGTACCGGCACCGTGCTCAACGCCAATCCGGCGTTTACCGGCAGCGGCGTCAACACTTTGCTCGCGGGCAACCAGAACCTGCAACCCGGCGAGCAGTGCACGCTCACGTTCACGGTGCAGATCGACTTTGGCAGCAATCCGCTGCCCGCCGCGACGCAGAACAACCAGGCTACGGCCACCACGGCGCAGACGCCCGGCGGCACGGTGATCGCCACGGATCTGTCGGACAACGGCGTCAACCCCGACCCCAACGCCAACGGCGACGCCAGCGAGCCAGGTGAAAACGACCCGACGCCGGTGAGCTTTGCCGCCGGCAGCCTGTCGTCGGTGAGTGGCACTGTGTATCTGGATGCCAACCACAACCGGGTCAACGACGATCCGCTGGCCACCACCCAGGTGCAGGGCTTTATCGTCGAAGTGCTGAACAGCGCCGGCACCGTGGTGGGCAGCGCGGTGACCGACGCCAGCGGCAACTACACCCTCGGTGGGCTTTTCCCCTCCACCCCGGGCAATGCGGCGACCGAATACAGCCTGCGTTTCCGCGAACCCGTTAGCGGGGCCATCTACGGTCTCGCGCAGTCGAGCGACCCCACACCCGCGCGCAACGGCACCATCCAGAACGGCATCATCACCGGACTGCAACTGGCACCGGGCGTCACGACGCTGGCGCAGAACCTGCCGCTCGATCCGTCCGGCGTGGTGTACGACTCGATCACGCGCACGCCGATTTCCGGCGCGCAGGTCACGCTGTTAAGTGGCGGCGCGGCGGTGCCGGGATCGTGTCTGGTCGGCGGCGTGAACACGCAGACGACCGGCCCGTCCGGCATGTACCAGTTCCTGCTGCTGAACCCCGCCCCCCCGGGCTGCCCCGGCACCGGTACCTACACGCTGCAAGTGGGGCAGCCGGGCGGTTACTTGCCGCCAGACTCGACGATCATTCCACCGACTGCCGGCCCCTACGTGCCGGGCAACGGCGGCACCGATGCAATCCAGGCCCAGCCCGGCGCGCCGAATGGTGCCGACCCCACGGTGTACTACACCAGTTTTGCGCTGACGCTCACCGGCGTGCCCGGCACCAGTTCGAGCAACGTGGTCAACAACCACATTCCGCTCGACCCGATTCTGGGCGGGGCCATTGCGCTCACCAAAACCACGCCGCTGGTGAATGTGAGCGTCGGCCAGCTGGTGCCGTACACGATCACCGCGCGCAACACGCTGGCGGCCACTCTCACCAACATCGACATCCGCGACACCGTGCCGCCGGGCTTCAAGTACAAACCGGGTAGCGCAACGATCAACGGCGTGCCGACCGAGCCCGCGATCAATGGCCGCGAACTCACCTGGACCAACCAGACGCTGGCGGCCAACGCCACGCGCACCATCAAGCTCCTGCTGGTGGTGGGGGCGGGCGTGCAGCCGGGCGAATACGTCAACTCGGCGCAAGCCTTCAACAACCTGGCCAATGCCGCAGTGTCGAGCGTGGCCACCGCCACCGTACGCGTGATTCCGGATGCCGTGTTCGACTGTTCCGACCTCATCGGGAAGGTGTTCGACGACCGGAACGCCAACGGCTACCAGGACGACGGCGAGCCCGGCATTGCCAACGTGCGCCTTGCCACCGCGCGCGGCTGGCTGGTGACCACCGACGCCGAAGGCCGCTTCCACGTGGCGTGCGCGGCGATTCCCGATGCCGATCGCGGCAGCAATTTCATCATGAAGCTGGACGAGCGTACCTTGCCGACCGGCTATCGCGTCACCACCGAAAACCCGCGTGACGTGCGGATCACGCGCGGCAAGCTGAGCAAGCTGAACTTCGGCGCGACGATCCACAAGGTGGTGCGGGTGGACATGAGCGATGCCGCGTTCGAAGCGGGCAAAACCACGCTGAAACCCGCCTGGACGAAGCAACTCGCTGCGTTGCCGGACAAGCTGAAAGCCCGTCCGTCAGTCCTGCGCCTCGGCTACAAGGCCGGTGCCGACGGTGAGGCACTTGCGCGCGAGCGTCTCGCCGCCGTCAGCCAGCAACTCCAGCGCACGTGGAAAGACAAGGCCTGTTGCCACACGCTGTTGATCGAGGAAGAACTCTTCTTGCCTGCCGCCAAGGCCAACAAGGAGGGCAAATAA
PROTEIN sequence
Length: 2548
MRFMTLPSLRAVRSGCVRLVAAASLLMAPAAWAGVDWVVNNSDTGFDPVIAGGNVVYVVSVSNNGNSAAASTSLILSIPATTSFISATGMSCSGSGPVTCTVPALSEAGGGSDSATVNVTLRTSVSGSVILGASVPAAGDDDVNNNVDNESTTVNAGADIALSLAGPASAQSGSTVSYTFTVLNNGPDTSPGQTLSFPVPTGLVGVTPPGGCTLAGSTYSCTVAALANGGSTTRVFTGQIAAASGSTLTPAGSIAAAGTPADPVSTNNTAVFNTTVTAGSDVRLTKSRAPAGTLIVGQAVNFTLTPSYSGDSPNTLTITDTLPANYTVGAVASPQNGWTCGVSGQTVTCTKPAGSGAGNAVSLGNVVIPATASGAGAGVVNTATISAAGPSDPNPANNSASDTAATIQAATVDLRANKSAPSPALVVTGVPYDYTISATNIGTAAFFGTLTMTDSLPAGVTANSYTLNGWSCLPAAPVAGPASITCTRVYTAGAPLAANATTPVVTLNATASGTGSLVNSMSVSSPDANLPDNNPGNDTTTAPVTSSVPGDSADLSVLKSVSPGTVAAGDVLTYTLEIVNAGPQAATTVSLADSLTSLINSSTGPTGAGYVGESLNAGVATGASCTSSASGGTTRNLNCAFASLPVCTAGVDCPVVTVQVRPGGNGGSRTNTVSVVSANTADPDAADRTASVTSTVTPRADVTVSKTANPASVPAGQNVTYVVTATNIANGLSDAGNVTVTDTLPANVTFVSATPSAGSCSTTPTANSTTGPGNDQIVCNFGTINNGAQRTLTIVVQPNTATRGSTLTNNVSVATSTTETDAGNNSASVNTAVLNPALDLLINKTDSVDPVAAGDNTVYTVTARNQGPSVAENVQITESLPPTRLSYQSHTVPAGGSCGTVPAVNSTGGTLVCQVPRLASGQTASFTVTLRGEIKGVDTNSVSLTSDEAALGFDTNAANNTVNETTTVRTKADMQVVSKIASANPVNLRDDFNFVVKVRNNVGAGLAEADNVVVSDTLPTNMQLTGTPTVAIIAGTTTSTTCSGNAGSVAFTCTLGTVSSGGEVDITVPVQIVAVSSTPQNFNNTASVATSSLDINAGNNSNSGSVSVNASSLAGRVFRDFNNDGLVTAGDTGIAGITLTLTGTSFDGAAISRTATTDASGNYSFANLPEGTYTLSEGAVSEAYLVDGIDTAGTVGGNASVNDVISAIALPANTAATGYTFAEVPQARIGIAKAVNAGPTVNPDGSFNVTFRLLVENFSLEALNSIVITDTLAGGTPRFGTQVTLGNPAADALNPGEYTLLAAPAGSCSGLNATYNGSASTTVASGFSLAAGGTCTVDLALRVRPTNPLPPLLPSGGRYDNQAVVNGTGALSGQTSATNPQLQDLSDNGSNPDPDNDNQANEAGENDPTPVLPAFNAAIGIAKRVNTQVSVQPDGSLLVPVRLVVSNVGNEPLNTVSVTDPLSTAAGGQFGGFVPGGAAAVLASGQYTVQTAPAFSGACANGATVGGFTGHSGNLAVATISAMAPAAVCTLDFVYRFNPGAALTYTNQAQASGTGDYSGSPVNDLSDDGTSPDPNSNGNAGEAGENDPTPVPVPRIGLAKSAGAVVNNGDGTYTVPFTLTVRNAGQTPLASVQVSDTLAGALPQFGTYTASAIPAAGHYTITSGPTVGAQTNGASLAAVAPGVFTGNGSGTNLLNPASSSLPNFGASASSAQISFTVRFFPTTPGPFENSAVSTASPPGGGTVQDDSVDGSNPDPNGNGTPNDDSSPTPVSLAAQAIGVAKSVSGIVQTGAKQYRVPYTIIVRNVSASVTATNVQVTDDVVATFPTAVTRTIAPPVAVSACTGTVLNANPAFTGSGVNTLLAGNQNLQPGEQCTLTFTVQIDFGSNPLPAATQNNQATATTAQTPGGTVIATDLSDNGVNPDPNANGDASEPGENDPTPVSFAAGSLSSVSGTVYLDANHNRVNDDPLATTQVQGFIVEVLNSAGTVVGSAVTDASGNYTLGGLFPSTPGNAATEYSLRFREPVSGAIYGLAQSSDPTPARNGTIQNGIITGLQLAPGVTTLAQNLPLDPSGVVYDSITRTPISGAQVTLLSGGAAVPGSCLVGGVNTQTTGPSGMYQFLLLNPAPPGCPGTGTYTLQVGQPGGYLPPDSTIIPPTAGPYVPGNGGTDAIQAQPGAPNGADPTVYYTSFALTLTGVPGTSSSNVVNNHIPLDPILGGAIALTKTTPLVNVSVGQLVPYTITARNTLAATLTNIDIRDTVPPGFKYKPGSATINGVPTEPAINGRELTWTNQTLAANATRTIKLLLVVGAGVQPGEYVNSAQAFNNLANAAVSSVATATVRVIPDAVFDCSDLIGKVFDDRNANGYQDDGEPGIANVRLATARGWLVTTDAEGRFHVACAAIPDADRGSNFIMKLDERTLPTGYRVTTENPRDVRITRGKLSKLNFGATIHKVVRVDMSDAAFEAGKTTLKPAWTKQLAALPDKLKARPSVLRLGYKAGADGEALARERLAAVSQQLQRTWKDKACCHTLLIEEELFLPAAKANKEGK*