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cn_combo_scaffold_4770_17

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(13907..14572)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z35_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 233.0
  • Bit_score: 194
  • Evalue 1.00e-46
lipopolysaccharide biosynthesis Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 237.0
  • Bit_score: 209
  • Evalue 5.60e-51
lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 233.0
  • Bit_score: 194
  • Evalue 2.90e-47

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
GGCACCCCCCAGCTGGCCGCCGCGATGGCGAACGCCTATGTCGAAGAGCTCTCCTCGCTGACCGGCCGCCTGGCGGTGACCGAAGCGCAGAAGCGCCGGCAGTTTCTTGAAAAAGAGCTGGCCAAGGCCAAAGAGAATCTGGTCAAGGCGGAAATCGCCCTGGGCGGCGCCGGCGTCAGCGAAGACACGCTGAAGTTCAACCCTGCAGTCATGGGTCAAGGCCTCGCCACCCTCAAGGCGCAAATCATGGCCAAGGAACTGCAGCTATCCAGCATGCGACTGGGCAAGTTCCAAAATACCCGCCCCAACGGAGATAATGCCGAATACATCAGCCGCTACCGCGACTTCAAATACAACGAAGTGCTGTTCGAACAGCTTTCCAAGCAATACGAACTGGCCAAAATTGACGAGTCCAGCGATGGCGCAGTAATCCAGGTTGTGGATGTGGCGGTGCCGCCAGAGCGCAAGTCCAATACCCCAAAATCGAAGATTGCCGCTCTGGCTGCGCTGGCCGCCGGCTTCGTGTTGCTGGTATTCGTGTTTGTTCGTCGTGCCCTGAAAAATGCCAACCAGAACCCCGAAAATACGGCCAAGTTCGCGGCCATCCGTGCCGGCTTTTTGCGGGTGCTGATGCCTTGGCGGCGGCCTGTAAAGGTGGGCCGCTGA
PROTEIN sequence
Length: 222
GTPQLAAAMANAYVEELSSLTGRLAVTEAQKRRQFLEKELAKAKENLVKAEIALGGAGVSEDTLKFNPAVMGQGLATLKAQIMAKELQLSSMRLGKFQNTRPNGDNAEYISRYRDFKYNEVLFEQLSKQYELAKIDESSDGAVIQVVDVAVPPERKSNTPKSKIAALAALAAGFVLLVFVFVRRALKNANQNPENTAKFAAIRAGFLRVLMPWRRPVKVGR*