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cn_combo_scaffold_40976_10

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(4243..4722)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Thiobacillus thioparus RepID=UPI0003781D21 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 159.0
  • Bit_score: 304
  • Evalue 8.60e-80
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 159.0
  • Bit_score: 299
  • Evalue 3.00e-78
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 159.0
  • Bit_score: 295
  • Evalue 1.10e-77

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGGCGCATCGCCGCCCCGTTCGGCATCAAGGGCTGGATCAAGGTCCAGCCCTACAGCGAAGACCCGGGCACGCTGATGGATTTCGCGTCCTGGCGCCTCGGGCGCGGCGAGCAGCAGGCGCATTACAGCGTCGAGGCCGTCCAGGACCACGGCAAGGCCCTGGTCGCAAAACTGGCCGGCATCGACGATCGCGACGCGGCCTACGCCCTGCGCGGACAGGAAATCTCGGTGGCGAAACGCGATCTGCCGCCGCCGGAAGAAAACGAGTTCTACTGGTCCGACCTGATCGGCCTGACCGTGGTCAACCGCGAAGGCGCCGAACTAGGCAAGGTCGACAGCCTGATGGAAGGCGGCGCGAACGACCTGCTGGTCGTCAAGGGCGCGCGCGAGCACCTGATTCCGTTCGTGGCGGCCTTTGTCGGCAAGGTGGACCTGGCCGGCGGGACGATCGAGGTGGACTGGGGCGAAGACTACTGA
PROTEIN sequence
Length: 160
MGRIAAPFGIKGWIKVQPYSEDPGTLMDFASWRLGRGEQQAHYSVEAVQDHGKALVAKLAGIDDRDAAYALRGQEISVAKRDLPPPEENEFYWSDLIGLTVVNREGAELGKVDSLMEGGANDLLVVKGAREHLIPFVAAFVGKVDLAGGTIEVDWGEDY*