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cn_combo_scaffold_1556_12

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 11248..12714

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCX8_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 488.0
  • Bit_score: 874
  • Evalue 3.70e-251
sigma-54 (RpoN) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 488.0
  • Bit_score: 874
  • Evalue 1.10e-251
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 488.0
  • Bit_score: 874
  • Evalue 5.20e-251

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGAAACCCACCCTTCAAGTCAAGCTGACTCCGCATCTTGCGCTTACGCCGCAATTGCAGCAATCCATCCGGTTATTGCAACTCTCCACGATAGAGCTGAACCAGGAGATAGAGCGCATCGTGCAGGAGAACCCCCTCCTGGAACTTGATGACAGCATCGTCAATGACAGCGCGGATTATCACAGAGTCATACCGGAGGAGTTGGCCGCACCGTTGCCAGATGAGCTGGAGGTTGCCGAGGAAAGCATATCCGTTCTCTCCATTGAAGCAGAGAGCGACGTAAAACATCCGCTTGATGAGCGGGAATGGCTTCCGGATGGCAGTATTTTTCGCCACAACCGGGACGATGAGGACGAACGCGATATTCCGCAACAAGCAGCGGAACGGCCAAGTCTGCGCGACCACCTCAACTCACAGCTCAGCCTGAGCCAGATCTCCCAGCGCGATAGAAAGATCACAGGATTGTTGATCGACAGCCTGGATGATGATGGCTATCTCGTCCAGGACCTGGAAGAACTGGTCGGCCTGTTGCCCGCCGAACTGGCAATAGATATCGACGATCTGCACATCGCTCTCGAACATTTGCAGCACCTGGATCCACCCGGCATCGGTGCGCGCAACCTAAGGGAATGCCTGGTCATGCAGCTGCATGCGCTGCCACCCGATACGCCCTACCTGGAGCAGGCGCTGGCGCTGGCGAACAATCATCTTGAAAGCCTGGCATCCCGGGACTTCAGCGCCATCAAGCGGGTTTTGCACTGCAACGACGACTGCCTTCGTTCCATCCAGCAGATGATAACGCGGTTGAATCCGAGACCGGCCACAGCCTTTAGCTCCGCAGTTGCCGGCTACATCGTACCCGACATCATCGTGACCAGAATCGGCGATTCATGGGTAGCCAGCCTTAACCCGGAAGCAATGCCGCGTCTCAGGATCAACCGGCTCTATGCCGAGATCCTGAAAGGATGCCATGATGACTCTACCCGTCGGCTGACCAGTCAATTGCACGAAGCAAAATGGCTGGTAAAGAACGTACAGCAGCGCTTCAACACCATCCTCAGGGTATCGGCAGCCATTGTTGAACGCCAGCAGCAGTTTTTCGAGCATGGAGCAGTTGCGATGCGTCCGATGATACTGCGTGAAATCGCCGATGTGCTGAATCTGCACGAATCCACCATTTCGCGGGTTACCACGCAGAAATTCATGCGGACGCCACGCGGTATTTTCGAATTGAAGTATTTCTTTGGCAGCCATGTATCAACGGATACCGGCGGCGCCTGCTCCGCTACCGCCATTCGCGCGCTGATCAAGCAAATGATCAATACAGAAAATTCAAGGAAGCCGCTCAGCGACAGTCAGATCTCGGAGGTTCTGGGACAGCAGGGTATCATGGTTGCTCGCCGCACCGTGGCAAAATACCGGGAGTCCTTGCAAATTCCCTCCGTCAATCTTCGGAAATCGTTTTAA
PROTEIN sequence
Length: 489
MKPTLQVKLTPHLALTPQLQQSIRLLQLSTIELNQEIERIVQENPLLELDDSIVNDSADYHRVIPEELAAPLPDELEVAEESISVLSIEAESDVKHPLDEREWLPDGSIFRHNRDDEDERDIPQQAAERPSLRDHLNSQLSLSQISQRDRKITGLLIDSLDDDGYLVQDLEELVGLLPAELAIDIDDLHIALEHLQHLDPPGIGARNLRECLVMQLHALPPDTPYLEQALALANNHLESLASRDFSAIKRVLHCNDDCLRSIQQMITRLNPRPATAFSSAVAGYIVPDIIVTRIGDSWVASLNPEAMPRLRINRLYAEILKGCHDDSTRRLTSQLHEAKWLVKNVQQRFNTILRVSAAIVERQQQFFEHGAVAMRPMILREIADVLNLHESTISRVTTQKFMRTPRGIFELKYFFGSHVSTDTGGACSATAIRALIKQMINTENSRKPLSDSQISEVLGQQGIMVARRTVAKYRESLQIPSVNLRKSF*