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cn_combo_scaffold_1942_5

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 4212..5483

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Pseudomonas fluorescens RepID=UPI00037D0E4C similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 422.0
  • Bit_score: 709
  • Evalue 2.30e-201
Integrase {ECO:0000313|EMBL:EXF95631.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 422.0
  • Bit_score: 709
  • Evalue 3.30e-201
integrase similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 409.0
  • Bit_score: 662
  • Evalue 7.10e-188

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGCTTACTGACACCCAATGCCGCACTGCCAAGCCCAAGGATAAACCTTACAAGCTGTCTGACGGCAAAGGACTGTATCTTGAAATTAAGCCCAATGGAGTCAAGGCTTGGCGCTACCGCTTCGAGTTGCGCGAAGGTGGGACAGTCAAGGAGAGCATCTTTGCAATCGGCAACTACGCCATTGCTGCAAACGGTGAAACGCTGGAAGAGGCGCAGGCTAGGCGGGGTGGTCGGCGTTTTACACTGGCCGAGGCTCGGGATGAGCGCGCCAAGGCACGGGCACTAGTCGAGCAGGGCATCAACCCGGCGCACAACCGGCAGCTAGACCGCATCAAGCGCGAACAGGAAAACGCCACGACATTCGAGGCCGTAGCGAAGGAATGGCTAGCCTTGAAGGATTGGGAGGAAGTCACCAAGAAGCGGCGGCTGGACATGCTCAACCGCGTGGTGTTCCCGACGATCGGATTACTGCCGGTTAAGAACATCACCCCAGCACACATCCTTCATGTGCTGAAAACGTCGGCAAAGAAAAATGGACTGACCGTCGCAGCAGAAGCTAAACGTAGCATGTCGGGCGTCTTTGAGCTGGCAGTGTCCACTCTGCGGGCGGAGTCCGACCCCGTCTATCCGGTGCGCAAGGCGTTGCCGGCCAACAAGACCCAGCACAAGCGCCCTCTCGATTCCAACGAGATCGGTCAGTTGCTGCGCGATGTGGAAGGGCATGGCGGTCGCCATGAAACCATTACTGCTTTTTTCCTCATGTGGCTAACCCTTTGCCGCCCAAGCGAGGCCGTTGAAGCGCGATGGGATGAATTCGACCTCGAAGCGGCGGTTTGGCGGATTCCCGCAGAGCGGATGAAGAAGCGCAAGGAGCATGCAATACCGCTGCCCACGCAAGCTGTTGAAATGCTGGGGGCGCTGTACGGAATCACTGGGCGCCATGCCCATCTATTCCCGCATCGTGATGACAGGACAAAGCCGATGGTCTCCGCATCATTCCGGCAAATGCTGAACGTCCTAGGCTGGGGAAAGAAGTACAGCCCACATGCCACCAGAACAACCGGAAGCACCCGGCTGAACGAGTTGGGGTATTCCTCCGACTGGATCGAACGGCAGTTAGCCCATGCCGAACCCAATGCCGTGCGGCGCACCTACAATCAGGCTGAATACTTGGGAGACCGCGCCAGGATGATGCAGCAATGGGCTGACATGCTGGATATATGGAAGAAGGGCGGCGATAAAGTGACACCGATCAAGCGGTCGGCAGCATAA
PROTEIN sequence
Length: 424
MLTDTQCRTAKPKDKPYKLSDGKGLYLEIKPNGVKAWRYRFELREGGTVKESIFAIGNYAIAANGETLEEAQARRGGRRFTLAEARDERAKARALVEQGINPAHNRQLDRIKREQENATTFEAVAKEWLALKDWEEVTKKRRLDMLNRVVFPTIGLLPVKNITPAHILHVLKTSAKKNGLTVAAEAKRSMSGVFELAVSTLRAESDPVYPVRKALPANKTQHKRPLDSNEIGQLLRDVEGHGGRHETITAFFLMWLTLCRPSEAVEARWDEFDLEAAVWRIPAERMKKRKEHAIPLPTQAVEMLGALYGITGRHAHLFPHRDDRTKPMVSASFRQMLNVLGWGKKYSPHATRTTGSTRLNELGYSSDWIERQLAHAEPNAVRRTYNQAEYLGDRARMMQQWADMLDIWKKGGDKVTPIKRSAA*