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cn_combo_scaffold_2020_6

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(5959..6288)

Top 3 Functional Annotations

Value Algorithm Source
Ethidium bromide-methyl viologen resistance protein EmrE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIA1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 108.0
  • Bit_score: 171
  • Evalue 6.00e-40
Multidrug transporter {ECO:0000313|EMBL:KIO50506.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. Np similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 108.0
  • Bit_score: 172
  • Evalue 3.70e-40
small multidrug resistance protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 108.0
  • Bit_score: 160
  • Evalue 3.00e-37

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCAATGGTTTTTCCTGTCTGTTGCAATTGTCAGTGAGGTGGTGGCAACCTCAGCCCTGAAATCGAGTAATGGTTTCACGCAGTTCTGGCCATCAGTAGTTGTCGTGGCGGGCTATGCTGTTGCTTTCTTCTTTCTCTCCCTTGCCTTGCGCACCCTGTCTGTGGGAATCGCATACGCTATCTGGTCTGGCGCCGGCATCGTCCTCATATCGCTTGTCGCCTGGCTCTTTCTCGGGCAAGCGCTCGATGGTCCCGCTATCCTGGGTCTCGCGCTCATTGTTGCCGGCGTGGTTATCCTGAACGTATTTTCCAGATCCACCATTCATTGA
PROTEIN sequence
Length: 110
MQWFFLSVAIVSEVVATSALKSSNGFTQFWPSVVVVAGYAVAFFFLSLALRTLSVGIAYAIWSGAGIVLISLVAWLFLGQALDGPAILGLALIVAGVVILNVFSRSTIH*