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cn_combo_scaffold_3198_18

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 17537..17851

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=323848 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 4.10e-52
Transcription termination factor Rho n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKG8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 2.90e-52
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 8.20e-53

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCATCTATCCGACCTCAAAAACTTCCATGTCACCGAACTGGTGGAGATGGCAATTGCCAATGAAATTGACGGCGCCAACCGGCTACGGAAACAGGATCTGATTTTCGCGTTATTAAAGAATCAGGCACGGAAAGGCGAAAGCATTTTCGGCGAAGGCACTCTGGAAGTGCTGCAGGATGGTTTCGGCTTCTTGCGTTCTCCTGACACCTCATATCTCGCCGGTCCGGATGACATTTATGTCTCACCCAGCCAGATACGGCGCTTCAACCTTCATACGGGAGATTCGATAGAGGGTGAAATAAGGACGCCCAAG
PROTEIN sequence
Length: 105
MHLSDLKNFHVTELVEMAIANEIDGANRLRKQDLIFALLKNQARKGESIFGEGTLEVLQDGFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGEIRTPK