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cn_combo_scaffold_3287_11

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(9905..11242)

Top 3 Functional Annotations

Value Algorithm Source
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI00036158E8 similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 450.0
  • Bit_score: 441
  • Evalue 1.30e-120
ATPase AAA {ECO:0000313|EMBL:KJC62240.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 450.0
  • Bit_score: 438
  • Evalue 8.70e-120
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 461.0
  • Bit_score: 428
  • Evalue 3.10e-117

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGGCAAGAATCCTGATCGTCGACGATGACATCGATTTCCGTGAAGGATTGGCGGAAACCGTGCATGATCTCGGTCACATAGCCTACGAGACTGGTTCATGCCGGACGGGACTGGATGCGCTGGAACAATCCCAATTCGATCTGATTATCCTCGACCATCGTCTCGGCGATACCAATGGGCTTGAATTCCTGCAACGAATGAGAGAACTCAAGCAACGCATTCCGCCTGTCATCATGCTGACCGCTTTCGCGACAGCAGCAGGCACTGTCGAAGCTATCAAACTCGGGGCATTCGATCACCTGCTCAAGCCCGTGGGACGCAATGATCTTGCGCGTGCTATCGAACGGGCCCTGCGATCGGGTAAAGGGGCGGATATAGCAGCGCCATTAAAAGTTGCCATCGAACCGGGCGAAGTGATCGGTAATTCGGCGCCAATGCGTGAAGTACTCAAGCTCATTGGATTGGCATCATCCACCAATGTGACAGTTCTGCTCACTGGCGAAACCGGCAGTGGCAAAGAAGTACTCGCGCGCCTGCTGCACGGGGCAAGCATGCGAGCGAAGGCACCTTTTATTGCCGTCAATTGCGCCGCGATCCCAGCGGAATTACTCGAAAGTGAACTGTTCGGACATGTAAAAGGCTCATTCACTGGAGCTGTGGCCGACCGTGCCGGACGTTTCCGCCAGGCGCGAGGGGGCACGTTGCTTCTGGATGAAATCGGCGATATGCCATTAACCATGCAGGCCAAGGTATTGCGGGTGATCGAAGACAAGCGTTTTACACCAGTGGGATCAGCGCAAGAGGAAAGCGCCGACGTTCGCCTTGTCGCGGCAACTCACCGCGATCTTGGCGAGTGGGTACGCGACGGCCATTTCCGTGAGGATCTCTATCACCGGCTTAGAGTATTACCAATACGTGTGCCGTCATTACGCGAAAGACCGGAAGATATTCCAGCATTGGCCAGTCATTTTCTGGCACATTTTTCGCATTCGGAAAAGCACCTTTCAGATGATGCGCTGGATTTGCTCCGTGCGTATACCTGGCCCGGAAACGTGCGCGAGTTACGCAACCTGATTGAACGTGCATGCGTCACAGTGCGTGGAACGATTATAGCCGAGAGTGATGTGAGCACACTGTTGAATCCTTCCAAAGCAATCGATATCTCTACAGCAGATCTTCTGCAACTTCCACTCCCCGAGGCGATATCAGGACTTGAGCGAATCATGATCCAGCAGGCATTGCGTGAGAGTCGAAATAATCGTGCCGAGGCCGCGCGCCGGCTCGGTATTCATCGACAACTCCTGTATGCCAAATTGAAAGAATATGGCCTTGATTGA
PROTEIN sequence
Length: 446
MARILIVDDDIDFREGLAETVHDLGHIAYETGSCRTGLDALEQSQFDLIILDHRLGDTNGLEFLQRMRELKQRIPPVIMLTAFATAAGTVEAIKLGAFDHLLKPVGRNDLARAIERALRSGKGADIAAPLKVAIEPGEVIGNSAPMREVLKLIGLASSTNVTVLLTGETGSGKEVLARLLHGASMRAKAPFIAVNCAAIPAELLESELFGHVKGSFTGAVADRAGRFRQARGGTLLLDEIGDMPLTMQAKVLRVIEDKRFTPVGSAQEESADVRLVAATHRDLGEWVRDGHFREDLYHRLRVLPIRVPSLRERPEDIPALASHFLAHFSHSEKHLSDDALDLLRAYTWPGNVRELRNLIERACVTVRGTIIAESDVSTLLNPSKAIDISTADLLQLPLPEAISGLERIMIQQALRESRNNRAEAARRLGIHRQLLYAKLKEYGLD*