Alias: SULFO_OTHER_55
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
|
AMDSBAU_55_1
unknown
|
Not on your lists |
44..271
----------------- DNA (228bp) protein (76aa) |
44..271 + ( gc_cont=0.658)
|
|
|
AMDSBAU_55_2
unknown
|
Not on your lists |
351..773
----------------- DNA (423bp) protein (141aa) |
351..773 + ( gc_cont=0.617)
|
|
|
AMDSBAU_55_3
unknown
|
Not on your lists |
907..1773
----------------- DNA (867bp) protein (289aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
seg (db=Seg db_id=seg from=9 to=22)
|
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AMDSBAU_55_4
unknown
|
Not on your lists |
1730..1915
----------------- DNA (186bp) protein (62aa) |
1730..1915 + ( gc_cont=0.618)
|
|
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AMDSBAU_55_5
unknown
|
Not on your lists |
1939..2544
----------------- DNA (606bp) protein (202aa) |
(db=HMMPfam db_id=PF05866 from=95 to=190 evalue=3.6e-06 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Holliday junction resolvase RusA (db=superfamily db_id=SSF103084 from=74 to=194 evalue=3.2e-08 interpro_id=IPR008822 interpro_description=Endodeoxyribonuclease, RusA-like GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
|
|
| AMDSBAU_55_6 |
Not on your lists |
comp(2740..3615)
----------------- DNA (876bp) protein (292aa) |
Integrase core domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYX7_9GAMM (db=UNIREF evalue=2.1e-31 bit_score=142.1 identity=32.3 coverage=93.15068493150685)
Fis family transcriptional regulator (EC:2.7.7.49)
(db=HMMPfam db_id=PF00665 from=122 to=239 evalue=1.7e-24 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=118 to=288 evalue=2.5e-29 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
|
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AMDSBAU_55_7
GWA2_RIF03_38_11_curated, RIF3, Bacteria
|
Not on your lists |
comp(3612..3911)
----------------- DNA (300bp) protein (100aa) |
Transposase
Transposase IS3/IS911 family protein n=9 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GAB8_SPITZ
coiled-coil (db=Coil db_id=coil from=62 to=83 evalue=NA)
(db=HMMPfam db_id=PF01527 from=4 to=77 evalue=1.4e-07 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911family GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
|
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AMDSBAU_55_8
unknown
|
Not on your lists |
4132..4584
----------------- DNA (453bp) protein (151aa) |
4132..4584 + ( gc_cont=0.558)
|
|
|
AMDSBAU_55_9
unknown
|
Not on your lists |
4914..5426
----------------- DNA (513bp) protein (171aa) |
seg (db=Seg db_id=seg from=64 to=74)
|
|
|
AMDSBAU_55_10
unknown
|
Not on your lists |
5574..5846
----------------- DNA (273bp) protein (91aa) |
seg (db=Seg db_id=seg from=46 to=55)
|
|
|
AMDSBAU_55_11
unknown
|
Not on your lists |
5941..6171
----------------- DNA (231bp) protein (77aa) |
5941..6171 + ( gc_cont=0.511)
|
|
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AMDSBAU_55_12
unknown
|
Not on your lists |
6563..6796
----------------- DNA (234bp) protein (78aa) |
seg (db=Seg db_id=seg from=9 to=13)
|
|
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AMDSBAU_55_13
unknown
|
Not on your lists |
comp(6854..7090)
----------------- DNA (237bp) protein (79aa) |
6854..7090 - ( gc_cont=0.620)
|
|
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AMDSBAU_55_14
unknown
|
Not on your lists |
8687..9022
----------------- DNA (336bp) protein (112aa) |
seg (db=Seg db_id=seg from=9 to=18)
|
|
|
AMDSBAU_55_15
unknown
|
Not on your lists |
9078..9386
----------------- DNA (309bp) protein (103aa) |
9078..9386 + ( gc_cont=0.576)
|
|
|
AMDSBAU_55_16
unknown
|
Not on your lists |
9551..10024
----------------- DNA (474bp) protein (158aa) |
9551..10024 + ( gc_cont=0.580)
|
|
|
AMDSBAU_55_17
unknown
|
Not on your lists |
10125..10877
----------------- DNA (753bp) protein (251aa) |
seg (db=Seg db_id=seg from=90 to=106)
|
|
|
AMDSBAU_55_18
unknown
|
Not on your lists |
10871..11491
----------------- DNA (621bp) protein (207aa) |
10871..11491 + ( gc_cont=0.596)
|
|
|
AMDSBAU_55_19
unknown
|
Not on your lists |
11505..11825
----------------- DNA (321bp) protein (107aa) |
11505..11825 + ( gc_cont=0.533)
|
|
|
AMDSBAU_55_20
unknown
|
Not on your lists |
comp(11813..12097)
----------------- DNA (285bp) protein (95aa) |
11813..12097 - ( gc_cont=0.572)
|
|
|
AMDSBAU_55_21
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
12282..13418
----------------- DNA (1137bp) protein (379aa) |
ATPase
ATPase associated with various cellular activities AAA_5 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3S354_FERPA (db=UNIREF evalue=1.3e-73 bit_score=282.7 identity=39.5 coverage=92.0844327176781)
coiled-coil (db=Coil db_id=coil from=328 to=349 evalue=NA)
seg (db=Seg db_id=seg from=194 to=216)
|
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AMDSBAU_55_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15099..16820
----------------- DNA (1722bp) protein (574aa) |
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9F1_SULAT
seg (db=Seg db_id=seg from=246 to=258)
|
|
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AMDSBAU_55_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16888..17463
----------------- DNA (576bp) protein (192aa) |
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9F2_SULAT
|