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AMDSBAU_2_15
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
GntR family transcriptional regulator similarity KEGG
DB: KEGG
28.1 249.0 82 1.30e-13 fri:FraEuI1c_5815
Transcriptional regulator, GntR family n=1 Tax=Frankia sp. EuI1c RepID=E3IX27_FRASU (db=UNIREF evalue=1.6e-13 bit_score=82.4 identity=28.1 coverage=96.17021276595744) similarity UNIREF
DB: UNIREF
28.0 96.0 82 1.00e+00 fri:FraEuI1c_5815
Transcriptional regulator {ECO:0000313|EMBL:EIE97355.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K6 UNIPROT
DB: UniProtKB
26.8 254.0 71 2.50e-09 I1CXD1_9PSEU
no description (db=HMMSmart db_id=SM00866 from=87 to=225 evalue=0.0026 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.60e-03 fri:FraEuI1c_5815
(db=HMMPfam db_id=PF00392 from=8 to=61 evalue=1.5e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 fri:FraEuI1c_5815
(db=HMMPfam db_id=PF07702 from=98 to=225 evalue=4.9e-07 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 fri:FraEuI1c_5815
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=76 evalue=8.3e-13) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 fri:FraEuI1c_5815
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=90 to=230 evalue=8.6e-08) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 fri:FraEuI1c_5815
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=69 evalue=9.4e-09 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
0.0 0.0 0 9.00e+00 fri:FraEuI1c_5815
HTH_GNTR (db=ProfileScan db_id=PS50949 from=4 to=73 evalue=16.387 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.60e+01 fri:FraEuI1c_5815