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AMDSBAU_20_20 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Protein containing GntR {ECO:0000313|EMBL:EQD59905.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" UNIPROT
DB: UniProtKB
48.7 152.0 149 8.10e-33 T1C177_9ZZZZ
GntR family transcriptional regulator similarity KEGG
DB: KEGG
33.5 227.0 110 6.50e-22 tsc:TSC_c11980
Transcriptional regulator, GntR family n=1 Tax=Thermus scotoductus SA-01 RepID=E8PQN6_THESS (db=UNIREF evalue=8.0e-22 bit_score=110.2 identity=33.5 coverage=82.12927756653993) similarity UNIREF
DB: UNIREF
33.0 82.0 110 8.00e+00 tsc:TSC_c11980
coiled-coil (db=Coil db_id=coil from=224 to=245 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 null tsc:TSC_c11980
seg (db=Seg db_id=seg from=216 to=233) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 tsc:TSC_c11980
HTHGNTR (db=FPrintScan db_id=PR00035 from=67 to=83 evalue=1.1e-09 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 tsc:TSC_c11980
HTHGNTR (db=FPrintScan db_id=PR00035 from=53 to=67 evalue=1.1e-09 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 tsc:TSC_c11980
no description (db=HMMSmart db_id=SM00345 from=34 to=93 evalue=1.5e-15 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 tsc:TSC_c11980
(db=HMMPfam db_id=PF07729 from=118 to=239 evalue=1.1e-22 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 tsc:TSC_c11980
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=19 to=122 evalue=1.6e-16) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 tsc:TSC_c11980
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=23 to=93 evalue=4.6e-13 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
0.0 0.0 0 4.00e+00 tsc:TSC_c11980
(db=HMMPfam db_id=PF00392 from=30 to=90 evalue=6.8e-16 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 tsc:TSC_c11980
no description (db=HMMSmart db_id=SM00895 from=117 to=240 evalue=7.9e-21 interpro_id=IPR011711 interpro_description=GntR, C-terminal) iprscan interpro
DB: HMMSmart
0.0 0.0 0 7.00e+00 tsc:TSC_c11980
HTH_GNTR (db=ProfileScan db_id=PS50949 from=28 to=97 evalue=18.902 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.80e+01 tsc:TSC_c11980