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AMDSBAU_27_20

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: comp(15778..16659)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 297.0
  • Bit_score: 299
  • Evalue 1.10e-78
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRZ9_ACIC1 (db=UNIREF evalue=1.4e-78 bit_score=298.9 identity=49.8 coverage=98.63945578231292) similarity UNIREF
DB: UNIREF
  • Identity: 49.0
  • Coverage: 98.0
  • Bit_score: 298
  • Evalue 1.00e+00
transmembrane_regions (db=TMHMM db_id=tmhmm from=217 to=239) iprscan interpro
DB: TMHMM
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 882
TTGCATCCCAGGGTTAAAAAGCGGACGCTGCGGGAGCAGCGTGCCGCCACAGGCGTTCTGTTTGCGTTGCCCCTGCTTATTTTTGAGGGTTGCCTTCTCTTCTTGCCCATTTTCGAAACCTTTTATTTTAGTTTCACAACATGGAACGGACTGAGTTCGCAGTTTGTGGGACTGAGCAATTACATAGCCCTGTTTACTGATCCGATCTTTTGGCGCATCTTAGCCAATAACGGCATATTGCTGCTGTCAATCCCCATTGCCATTATGATTCCTCTGGGGGCTGCATACCTATTACAACGACACGTCACCGGATGGAAATTCTTTCAAAGCGCCTTTTATTTGCCTACCGTAATCTCTTGGGTTGTAATTGGCATGGTAGCTGTCGAAGTATTTGCCGGTCGCGGCGTTCTGAATCGCTTTCTCTCGATCTTTGGGCTTCATCAAAACATGCTGGCACATCCGGTGTCAGCCTTGATCGTAATCCTCATTGCGTTCATTTGGTCGTTATTCGGGTCTAACATGGTCATTTTCATTGGTGGAATGGCCACGATGGCTCCAGAACTTTACGAGGCGGCGCGGATCGACGGTGCCAACGAACTTAAAACGTTTTGGTACATCACAATTCCCCTATTGCGCCGCTTCATTCAATTGAATTTTATTTTGACGTTAATTACCGCATTCACCGGCCTATTCAGCCTCATTTTTGTGATGACCGGAGGAGGCCCTGGGTTTGGTACCACGACGCTCGAGTTCTTCATTTATCAGCAGGCCTTCGACTCCGGCGCCTTTGGAGAGGCAGCGACACTGGGGGTCGTACTGTTCATCTTGATGTTTGCCGTAACCCTATTTCAGGTGCCACTACTGTTACGTGAGGACGATTAG
PROTEIN sequence
Length: 294
LHPRVKKRTLREQRAATGVLFALPLLIFEGCLLFLPIFETFYFSFTTWNGLSSQFVGLSNYIALFTDPIFWRILANNGILLLSIPIAIMIPLGAAYLLQRHVTGWKFFQSAFYLPTVISWVVIGMVAVEVFAGRGVLNRFLSIFGLHQNMLAHPVSALIVILIAFIWSLFGSNMVIFIGGMATMAPELYEAARIDGANELKTFWYITIPLLRRFIQLNFILTLITAFTGLFSLIFVMTGGGPGFGTTTLEFFIYQQAFDSGAFGEAATLGVVLFILMFAVTLFQVPLLLREDD*