ggKbase home page

AMDSBAU_32_22 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Uncharacterized protein {ECO:0000313|EMBL:EIT69132.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni UNIPROT
DB: UniProtKB
45.6 57.0 61 7.20e-07 I7ZBU6_9GAMM
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBU6_9GAMM (db=UNIREF evalue=1.8e-07 bit_score=60.8 identity=45.6 coverage=65.11627906976744) similarity UNIREF
DB: UNIREF
45.0 65.0 60 1.00e+00
seg (db=Seg db_id=seg from=41 to=51) iprscan interpro
DB: Seg
0.0 0.0 0 0.0
ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1) (db=HMMPanther db_id=PTHR10245 from=8 to=53 evalue=0.00094) iprscan interpro 0.0 0.0 0 9.40e-04
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=2 to=62 evalue=1.2e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=2 to=62 evalue=1.7e-14 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00
no description (db=HMMSmart db_id=SM00530 from=3 to=58 evalue=3.6e-16 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00
(db=HMMPfam db_id=PF01381 from=4 to=56 evalue=4.5e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=4 to=59 evalue=15.266 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.50e+01