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AMDSBAU_32

Alias: SULFO_OTHER_32

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_32_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88..1287
-----------------
DNA (1200bp)
protein (400aa)
transposase IS116/IS110/IS902 family protein rbh
transposase IS116/IS110/IS902 family protein rbh
Transposase IS116/IS110/IS902 n=2 Tax=Sulfobacillus acidophilus RepID=F8IBD2_SULAT
Transposase IS116/IS110/IS902 n=2 Tax=Sulfobacillus acidophilus RepID=F8IBD2_SULAT (db=UNIREF evalue=4.1e-203 bit_score=713.0 identity=90.2 coverage=99.5)
AMDSBAU_32_2
unknown

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comp(1497..1733)
-----------------
DNA (237bp)
protein (79aa)
1497..1733 - ( gc_cont=0.494)
AMDSBAU_32_3
unknown

Not on your lists

comp(1953..2456)
-----------------
DNA (504bp)
protein (168aa)
seg (db=Seg db_id=seg from=93 to=103)
AMDSBAU_32_4
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2518..3090
-----------------
DNA (573bp)
protein (191aa)
Resolvase-like protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ95_9FIRM (db=UNIREF evalue=5.5e-65 bit_score=253.1 identity=70.5 coverage=95.28795811518324)
Resolvase domain protein
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=5 to=13 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
RECOMBINASES_2 (db=PatternScan db_id=PS00398 from=55 to=67 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
AMDSBAU_32_5
unknown

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3181..3498
-----------------
DNA (318bp)
protein (106aa)
seg (db=Seg db_id=seg from=33 to=41)
seg (db=Seg db_id=seg from=51 to=62)
AMDSBAU_32_6
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3946..4698
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8M309_BACCE (db=UNIREF evalue=7.3e-41 bit_score=173.3 identity=38.7 coverage=93.22709163346613)
seg (db=Seg db_id=seg from=239 to=250)
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=40 to=158 evalue=5.5e-06 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
AMDSBAU_32_7
unknown

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4647..5060
-----------------
DNA (414bp)
protein (138aa)
coiled-coil (db=Coil db_id=coil from=101 to=136 evalue=NA)
seg (db=Seg db_id=seg from=4 to=12)
AMDSBAU_32_8
unknown

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5050..5934
-----------------
DNA (885bp)
protein (295aa)
seg (db=Seg db_id=seg from=119 to=131)
seg (db=Seg db_id=seg from=139 to=150)
AMDSBAU_32_9
unknown

Not on your lists

comp(6254..6376)
-----------------
DNA (123bp)
protein (41aa)
6254..6376 - ( gc_cont=0.618)
AMDSBAU_32_10
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6571..7689
-----------------
DNA (1119bp)
protein (373aa)
DNA sulfur modification protein DndB n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AQ92_RHOBT
DNA sulfur modification protein DndB
DNA sulfur modification protein DndB
DNA sulfur modification protein DndB n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AQ92_RHOBT (db=UNIREF evalue=3.1e-96 bit_score=357.8 identity=51.4 coverage=94.36997319034852)
AMDSBAU_32_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7690..9195
-----------------
DNA (1506bp)
protein (502aa)
Putative sulfurtransferase DndC n=1 Tax=Moorea producens 3L RepID=F4Y0V1_9CYAN
Putative sulfurtransferase DndC n=1 Tax=Moorea producens 3L RepID=F4Y0V1_9CYAN (db=UNIREF evalue=5.2e-147 bit_score=526.9 identity=54.8 coverage=97.21115537848605)
sulfurtransferase DndC
sulfurtransferase DndC
AMDSBAU_32_12
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9195..11162
-----------------
DNA (1968bp)
protein (656aa)
DNA sulfur modification protein DndD
DNA sulfur modification protein DndD
DNA sulfur modification protein DndD n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UFG6_CYAP2
DNA sulfur modification protein DndD n=1 Tax=Cyanothece sp. PCC 7822 RepID=E0UFG6_CYAP2 (db=UNIREF evalue=6.5e-81 bit_score=307.8 identity=30.6 coverage=96.64634146341463)
AMDSBAU_32_13
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11163..11543
-----------------
DNA (381bp)
protein (127aa)
DNA sulfur modification protein DndE n=1 Tax=Lachnospiraceae bacterium 4_1_37FAA RepID=E9RUP9_9FIRM (db=UNIREF evalue=1.1e-37 bit_score=161.8 identity=61.3 coverage=96.8503937007874)
DNA sulfur modification protein DndE
(db=HMMPfam db_id=PF08870 from=5 to=116 evalue=1.9e-37 interpro_id=IPR014969 interpro_description=DNA sulphur modification protein DndE)
DNA_S_dndE: DNA sulfur modification protei (db=HMMTigr db_id=TIGR03184 from=6 to=110 evalue=2.1e-53 interpro_id=IPR014969 interpro_description=DNA sulphur modification protein DndE)
AMDSBAU_32_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11691..11933
-----------------
DNA (243bp)
protein (81aa)
SirA-like domain-containing protein
SirA-like domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUD9_SULAD (db=UNIREF evalue=7.7e-16 bit_score=88.6 identity=55.6 coverage=87.65432098765432)
UPF0033 (db=PatternScan db_id=PS01148 from=11 to=35 evalue=0.0 interpro_id=IPR001455 interpro_description=TusA-like domain)
SirA-like (db=superfamily db_id=SSF64307 from=9 to=78 evalue=1.9e-21 interpro_id=IPR001455 interpro_description=TusA-like domain)
AMDSBAU_32_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11930..12448)
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8LGY0_BACCE (db=UNIREF evalue=2.5e-24 bit_score=117.9 identity=41.1 coverage=83.23699421965318)
hypothetical protein
AMDSBAU_32_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12452..14350)
-----------------
DNA (1899bp)
protein (633aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8LY44_BACCE
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8LY44_BACCE (db=UNIREF evalue=7.8e-132 bit_score=476.9 identity=38.8 coverage=98.5781990521327)
hypothetical protein rbh
hypothetical protein rbh
AMDSBAU_32_17
unknown

Not on your lists

comp(14343..14513)
-----------------
DNA (171bp)
protein (57aa)
14343..14513 - ( gc_cont=0.485)
AMDSBAU_32_18
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14514..16439)
-----------------
DNA (1926bp)
protein (642aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8LYD1_BACCE
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8LYD1_BACCE (db=UNIREF evalue=7.5e-183 bit_score=646.4 identity=50.1 coverage=97.0404984423676)
hypothetical protein
hypothetical protein
AMDSBAU_32_19
Peptoniphilus rhinitidis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16654..17628)
-----------------
DNA (975bp)
protein (325aa)
seg (db=Seg db_id=seg from=217 to=231)
(db=HMMPfam db_id=PF06114 from=81 to=178 evalue=3.7e-13 interpro_id=IPR010359 interpro_description=Protein of unknown function DUF955)
AMDSBAU_32_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17591..17968)
-----------------
DNA (378bp)
protein (126aa)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=7 to=115 evalue=2.1e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=11 to=64 evalue=5.5e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=10 to=65 evalue=8.8e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=73 evalue=8.7e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBAU_32_21
unknown

Not on your lists

18237..18539
-----------------
DNA (303bp)
protein (101aa)
18237..18539 + ( gc_cont=0.521)
AMDSBAU_32_22
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18577..18834
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBU6_9GAMM (db=UNIREF evalue=1.8e-07 bit_score=60.8 identity=45.6 coverage=65.11627906976744)
seg (db=Seg db_id=seg from=41 to=51)
ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1) (db=HMMPanther db_id=PTHR10245 from=8 to=53 evalue=0.00094)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=2 to=62 evalue=1.2e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBAU_32_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(18883..19224)
-----------------
DNA (342bp)
protein (114aa)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=41 to=110 evalue=1.9e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=44 to=101 evalue=2.3e-15 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=33 to=113 evalue=2.9e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=45 to=101 evalue=8.3e-14 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBAU_32_24
unknown

Not on your lists

19679..20509
-----------------
DNA (831bp)
protein (277aa)
coiled-coil (db=Coil db_id=coil from=80 to=105 evalue=NA)
seg (db=Seg db_id=seg from=172 to=185)
AMDSBAU_32_25
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20548..21228
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein AcavA_04002 n=1 Tax=Aeromonas caviae Ae398 RepID=UPI0002197ADA (db=UNIREF evalue=3.3e-08 bit_score=64.7 identity=32.2 coverage=47.136563876651984)
seg (db=Seg db_id=seg from=102 to=114)
AMDSBAU_32_26
unknown

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21256..21501
-----------------
DNA (246bp)
protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBAU_32_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21522..21968
-----------------
DNA (447bp)
protein (149aa)
conserved hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM62_9DELT
(db=HMMPfam db_id=PF03681 from=74 to=121 evalue=2.5e-16 interpro_id=IPR005357 interpro_description=Uncharacterised domain UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=73 to=143 evalue=9.5e-18)
AMDSBAU_32_28
unknown

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22054..22347
-----------------
DNA (294bp)
protein (98aa)
22054..22347 + ( gc_cont=0.575)
Displaying 28 items

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