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AMDSBAU_38_7 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
phosphonates metabolism transcriptional regulator PhnF similarity KEGG
DB: KEGG
29.7 232.0 84 5.90e-14 pgv:SL003B_0429
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAJ81944.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensi UNIPROT
DB: UniProtKB
30.7 254.0 84 2.90e-13 A0A034UBA7_9NOCA
Phosphonates metabolism transcriptional regulator PhnF n=1 Tax=Polymorphum gilvum SL003B-26A1 RepID=F2J2Z4_POLGS (db=UNIREF evalue=7.2e-14 bit_score=83.6 identity=29.7 coverage=92.85714285714286) similarity UNIREF
DB: UNIREF
29.0 92.0 83 7.00e+00 pgv:SL003B_0429
no description (db=HMMSmart db_id=SM00866 from=87 to=226 evalue=0.0033 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.30e-03 pgv:SL003B_0429
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=77 to=229 evalue=1.4e-10) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 pgv:SL003B_0429
(db=HMMPfam db_id=PF07702 from=112 to=226 evalue=2.4e-10 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 pgv:SL003B_0429
no description (db=HMMSmart db_id=SM00345 from=10 to=69 evalue=2.9e-07 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 pgv:SL003B_0429
(db=HMMPfam db_id=PF00392 from=9 to=61 evalue=3.2e-14 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 pgv:SL003B_0429
HTHGNTR (db=FPrintScan db_id=PR00035 from=43 to=59 evalue=5.0e-07 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 5.00e+00 pgv:SL003B_0429
HTHGNTR (db=FPrintScan db_id=PR00035 from=29 to=43 evalue=5.0e-07 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 5.00e+00 pgv:SL003B_0429
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=64 evalue=5.2e-09 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 pgv:SL003B_0429
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=64 evalue=8.8e-13) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 pgv:SL003B_0429
HTH_GNTR (db=ProfileScan db_id=PS50949 from=4 to=73 evalue=18.005 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.80e+01 pgv:SL003B_0429