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AMDSBAU_38

Alias: SULFO_OTHER_38

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBAU_38_1
unknown

Not on your lists

comp(3..176)
-----------------
DNA (174bp)
protein (58aa)
3..176 - ( gc_cont=0.580)
AMDSBAU_38_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(196..1194)
-----------------
DNA (999bp)
protein (333aa)
parB-like partition protein
Chromosome partitioning protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTE1_RHOMO (db=UNIREF evalue=8.3e-24 bit_score=117.1 identity=38.2 coverage=61.261261261261254)
coiled-coil (db=Coil db_id=coil from=146 to=167 evalue=NA)
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=51 to=233 evalue=1.8e-27 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
AMDSBAU_38_3
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1164..1985)
-----------------
DNA (822bp)
protein (274aa)
ParA-like protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CIX7_9FIRM (db=UNIREF evalue=2.6e-76 bit_score=291.2 identity=55.5 coverage=92.33576642335767)
cobyrinic acid ac-diamide synthase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=12 to=271 evalue=4.7e-53)
(db=HMMPfam db_id=PF01656 from=16 to=232 evalue=6.9e-34 interpro_id=IPR002586 interpro_description=Cobyrinic acid a,c-diamide synthase)
AMDSBAU_38_4
unknown

Not on your lists

comp(1946..2344)
-----------------
DNA (399bp)
protein (133aa)
seg (db=Seg db_id=seg from=85 to=96)
AMDSBAU_38_5
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2962..3972
-----------------
DNA (1011bp)
protein (337aa)
Putative uncharacterized protein orfL2 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CIX3_9FIRM (db=UNIREF evalue=1.3e-29 bit_score=136.3 identity=31.4 coverage=75.37091988130564)
seg (db=Seg db_id=seg from=172 to=184)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=20 to=82 evalue=2.1e-06)
AMDSBAU_38_6
unknown

Not on your lists

comp(3977..4954)
-----------------
DNA (978bp)
protein (326aa)
3977..4954 - ( gc_cont=0.583)
AMDSBAU_38_7
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4997..5710)
-----------------
DNA (714bp)
protein (238aa)
phosphonates metabolism transcriptional regulator PhnF
Phosphonates metabolism transcriptional regulator PhnF n=1 Tax=Polymorphum gilvum SL003B-26A1 RepID=F2J2Z4_POLGS (db=UNIREF evalue=7.2e-14 bit_score=83.6 identity=29.7 coverage=92.85714285714286)
no description (db=HMMSmart db_id=SM00866 from=87 to=226 evalue=0.0033 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=77 to=229 evalue=1.4e-10)
AMDSBAU_38_8
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5707..6339)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein, putative amidase n=1 Tax=Frankia sp. QA3 RepID=I9A370_9ACTO (db=UNIREF evalue=1.4e-37 bit_score=162.2 identity=42.2 coverage=96.6824644549763)
creatininase
seg (db=Seg db_id=seg from=113 to=125)
Creatininase (db=superfamily db_id=SSF102215 from=4 to=209 evalue=4.2e-35 interpro_id=IPR024087 interpro_description=Creatininase-like domain)
AMDSBAU_38_9
unknown

Not on your lists

7216..7734
-----------------
DNA (519bp)
protein (173aa)
7216..7734 + ( gc_cont=0.607)
AMDSBAU_38_10
unknown

Not on your lists

7773..8543
-----------------
DNA (771bp)
protein (257aa)
7773..8543 + ( gc_cont=0.628)
AMDSBAU_38_11
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8552..10129
-----------------
DNA (1578bp)
protein (526aa)
Putative lytic transglycosylase n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ16_9FIRM (db=UNIREF evalue=2.9e-148 bit_score=531.2 identity=51.7 coverage=98.09885931558935)
lytic transglycosylase
seg (db=Seg db_id=seg from=9 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBAU_38_12
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10146..10946
-----------------
DNA (801bp)
protein (267aa)
Putative uncharacterized protein orfL46 n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ17_9FIRM (db=UNIREF evalue=2.0e-44 bit_score=185.3 identity=40.5 coverage=92.50936329588015)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=8 to=19)
seg (db=Seg db_id=seg from=73 to=86)
AMDSBAU_38_13
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

10962..12683
-----------------
DNA (1722bp)
protein (574aa)
putative helicase
Putative helicase n=1 Tax=Waddlia chondrophila WSU 86-1044 RepID=D6YX19_WADCW (db=UNIREF evalue=1.4e-76 bit_score=293.1 identity=33.1 coverage=89.02439024390245)
seg (db=Seg db_id=seg from=478 to=488)
seg (db=Seg db_id=seg from=11 to=31)
AMDSBAU_38_14
unknown

Not on your lists

12867..14669
-----------------
DNA (1803bp)
protein (601aa)
seg (db=Seg db_id=seg from=553 to=564)
seg (db=Seg db_id=seg from=390 to=401)
AMDSBAU_38_15
unknown

Not on your lists

14694..14963
-----------------
DNA (270bp)
protein (90aa)
14694..14963 + ( gc_cont=0.704)
AMDSBAU_38_16
unknown

Not on your lists

14963..15163
-----------------
DNA (201bp)
protein (67aa)
seg (db=Seg db_id=seg from=52 to=64)
AMDSBAU_38_17
unknown

Not on your lists

15114..15305
-----------------
DNA (192bp)
protein (64aa)
seg (db=Seg db_id=seg from=52 to=63)
AMDSBAU_38_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15305..17248
-----------------
DNA (1944bp)
protein (648aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KSP7_9THEO
TRAG family protein
seg (db=Seg db_id=seg from=10 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
AMDSBAU_38_19
unknown

Not on your lists

17299..18546
-----------------
DNA (1248bp)
protein (416aa)
coiled-coil (db=Coil db_id=coil from=246 to=274 evalue=NA)
seg (db=Seg db_id=seg from=49 to=62)
seg (db=Seg db_id=seg from=183 to=201)
seg (db=Seg db_id=seg from=261 to=281)
AMDSBAU_38_20
unknown

Not on your lists

18530..19261
-----------------
DNA (732bp)
protein (244aa)
18530..19261 + ( gc_cont=0.728)
AMDSBAU_38_21
unknown

Not on your lists

19275..19484
-----------------
DNA (210bp)
protein (70aa)
19275..19484 + ( gc_cont=0.624)
AMDSBAU_38_22
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

19484..20122
-----------------
DNA (639bp)
protein (213aa)
Minus agglutinin n=4 Tax=Chlamydomonas reinhardtii RepID=Q6SSE8_CHLRE
RNA polymerase sigma factor
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
seg (db=Seg db_id=seg from=178 to=203)
AMDSBAU_38_23

Not on your lists

20151..20762
-----------------
DNA (612bp)
protein (204aa)
DNA primase
seg (db=Seg db_id=seg from=7 to=20)
no description (db=HMMSmart db_id=SM00400 from=40 to=96 evalue=0.0078 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
Zinc beta-ribbon (db=superfamily db_id=SSF57783 from=6 to=109 evalue=1.4e-19)
AMDSBAU_38_24
unknown

Not on your lists

20759..20839
-----------------
DNA (81bp)
protein (27aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Displaying 24 items

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