ggKbase home page

AMDSBAU_74_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Predicted transcriptional regulator xre family {ECO:0000313|EMBL:CDA91305.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental sampl UNIPROT
DB: UniProtKB
44.3 61.0 55 3.70e-05 R6DUI1_9FIRM
(db=HMMPfam db_id=PF01381 from=2 to=53 evalue=1.2e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00
no description (db=HMMSmart db_id=SM00530 from=2 to=53 evalue=1.1e-07 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=57 evalue=5.6e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=6.0e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
0.0 0.0 0 6.00e+00
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=2 to=53 evalue=12.612 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.20e+01