Alias: SULFO_OTHER_74
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBAU_74_1
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2..238)
----------------- DNA (237bp) protein (79aa) |
(db=HMMPfam db_id=PF01381 from=2 to=53 evalue=1.2e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=2 to=53 evalue=1.1e-07 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=57 evalue=5.6e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=6.0e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
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AMDSBAU_74_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
360..590
----------------- DNA (231bp) protein (77aa) |
(db=HMMPfam db_id=PF01381 from=4 to=56 evalue=1.1e-17 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=62 evalue=4.9e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=2 to=62 evalue=4.4e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=3 to=58 evalue=5.2e-16 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
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AMDSBAU_74_3
unknown
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Not on your lists |
669..938
----------------- DNA (270bp) protein (90aa) |
669..938 + ( gc_cont=0.570)
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AMDSBAU_74_4
unknown
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Not on your lists |
935..1132
----------------- DNA (198bp) protein (66aa) |
935..1132 + ( gc_cont=0.631)
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AMDSBAU_74_5
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria
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Not on your lists |
1134..2114
----------------- DNA (981bp) protein (327aa) |
Uncharacterized protein n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RST7_9LACO (db=UNIREF evalue=3.2e-20 bit_score=105.1 identity=32.9 coverage=61.46788990825688)
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AMDSBAU_74_6
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria
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Not on your lists |
2107..2808
----------------- DNA (702bp) protein (234aa) |
2107..2808 + ( gc_cont=0.554)
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AMDSBAU_74_7
unknown
|
Not on your lists |
2824..3279
----------------- DNA (456bp) protein (152aa) |
2824..3279 + ( gc_cont=0.520)
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AMDSBAU_74_8
unknown
|
Not on your lists |
3279..3419
----------------- DNA (141bp) protein (47aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
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AMDSBAU_74_9
unknown
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Not on your lists |
3419..3625
----------------- DNA (207bp) protein (69aa) |
3419..3625 + ( gc_cont=0.580)
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AMDSBAU_74_10
unknown
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Not on your lists |
3612..3812
----------------- DNA (201bp) protein (67aa) |
3612..3812 + ( gc_cont=0.607)
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AMDSBAU_74_11
unknown
|
Not on your lists |
3775..3960
----------------- DNA (186bp) protein (62aa) |
seg (db=Seg db_id=seg from=44 to=56)
seg (db=Seg db_id=seg from=5 to=20)
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AMDSBAU_74_12
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria
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Not on your lists |
3965..4894
----------------- DNA (930bp) protein (310aa) |
Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR38_9FIRM (db=UNIREF evalue=4.7e-29 bit_score=134.4 identity=36.0 coverage=61.935483870967744)
HNH endonuclease
coiled-coil (db=Coil db_id=coil from=150 to=171 evalue=NA)
seg (db=Seg db_id=seg from=180 to=192)
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| AMDSBAU_74_13 |
Not on your lists |
4872..6869
----------------- DNA (1998bp) protein (666aa) |
dnaB-2; replicative DNA helicase
DNA replication protein DnaC n=5 Tax=Selenomonas RepID=C4V1W0_9FIRM
coiled-coil (db=Coil db_id=coil from=77 to=98 evalue=NA)
seg (db=Seg db_id=seg from=338 to=353)
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AMDSBAU_74_14
unknown
|
Not on your lists |
6873..7148
----------------- DNA (276bp) protein (92aa) |
6873..7148 + ( gc_cont=0.667)
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AMDSBAU_74_15
unknown
|
Not on your lists |
7145..7447
----------------- DNA (303bp) protein (101aa) |
7145..7447 + ( gc_cont=0.650)
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AMDSBAU_74_16
Salmonella phage SSE-121, Caudovirales, Viruses
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Not on your lists |
7447..8025
----------------- DNA (579bp) protein (193aa) |
Uncharacterized protein n=2 Tax=unclassified Myoviridae RepID=K4I1M9_9VIRU (db=UNIREF evalue=2.2e-21 bit_score=108.2 identity=38.4 coverage=74.09326424870466)
DNA methyltransferase
N6_MTASE (db=PatternScan db_id=PS00092 from=105 to=111 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=5 to=159 evalue=1.8e-16)
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AMDSBAU_74_17
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8022..9278
----------------- DNA (1257bp) protein (419aa) |
DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Xanthomonas albilineans GPE PC73 RepID=D2U9G0_XANAP (db=UNIREF evalue=3.3e-70 bit_score=271.6 identity=42.7 coverage=92.60143198090692)
C5_MTASE_1 (db=PatternScan db_id=PS00094 from=63 to=75 evalue=0.0 interpro_id=IPR018117 interpro_description=DNA methylase, C-5 cytosine-specific, active site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
C5_MTASE_2 (db=PatternScan db_id=PS00095 from=365 to=383 evalue=0.0 interpro_id=IPR018117 interpro_description=DNA methylase, C-5 cytosine-specific, active site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
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AMDSBAU_74_18
unknown
|
Not on your lists |
comp(9172..9396)
----------------- DNA (225bp) protein (75aa) |
9172..9396 - ( gc_cont=0.533)
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AMDSBAU_74_19
unknown
|
Not on your lists |
9507..9755
----------------- DNA (249bp) protein (83aa) |
9507..9755 + ( gc_cont=0.606)
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AMDSBAU_74_20
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria
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Not on your lists |
9752..10084
----------------- DNA (333bp) protein (111aa) |
Putative bacteriophage-related protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ23_9FIRM (db=UNIREF evalue=6.1e-16 bit_score=89.4 identity=50.0 coverage=84.68468468468468)
hypothetical protein
N-(deoxy)ribosyltransferase-like (db=superfamily db_id=SSF52309 from=1 to=100 evalue=1.6e-10)
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AMDSBAU_74_21
unknown
|
Not on your lists |
10081..10218
----------------- DNA (138bp) protein (46aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=10 to=23)
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AMDSBAU_74_22
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
10222..10785
----------------- DNA (564bp) protein (188aa) |
RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DV94_9BACL (db=UNIREF evalue=9.4e-09 bit_score=66.2 identity=28.1 coverage=88.82978723404256)
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=17 to=89 evalue=1.3e-09 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto
(db=HMMPfam db_id=PF04542 from=19 to=87 evalue=1.1e-09 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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AMDSBAU_74_23
unknown
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Not on your lists |
10899..11684
----------------- DNA (786bp) protein (262aa) |
(db=HMMPfam db_id=PF00196 from=151 to=180 evalue=5.3e-05 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
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AMDSBAU_74_24
unknown
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Not on your lists |
11741..12262
----------------- DNA (522bp) protein (174aa) |
seg (db=Seg db_id=seg from=152 to=162)
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AMDSBAU_74_25
unknown
|
Not on your lists |
12255..12863
----------------- DNA (609bp) protein (203aa) |
12255..12863 + ( gc_cont=0.568)
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AMDSBAU_74_26
unknown
|
Not on your lists |
12908..13300
----------------- DNA (393bp) protein (131aa) |
coiled-coil (db=Coil db_id=coil from=77 to=112 evalue=NA)
seg (db=Seg db_id=seg from=89 to=107)
seg (db=Seg db_id=seg from=73 to=86)
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AMDSBAU_74_27
unknown
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Not on your lists |
13290..13478
----------------- DNA (189bp) protein (63aa) |
13290..13478 + ( gc_cont=0.534)
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AMDSBAU_74_28
unknown
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Not on your lists |
13475..13957
----------------- DNA (483bp) protein (161aa) |
13475..13957 + ( gc_cont=0.520)
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AMDSBAU_74_29
unknown
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Not on your lists |
13954..14244
----------------- DNA (291bp) protein (97aa) |
13954..14244 + ( gc_cont=0.591)
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