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AMDSBAU_74_22

Organism: Sulfo_Unknown_Bin

partial RP 4 / 55 MC: 1 BSCG 5 / 51 ASCG 0 / 38
Location: 10222..10785

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DV94_9BACL (db=UNIREF evalue=9.4e-09 bit_score=66.2 identity=28.1 coverage=88.82978723404256) similarity UNIREF
DB: UNIREF
  • Identity: 28.0
  • Coverage: 88.0
  • Bit_score: 66
  • Evalue 9.00e+00
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 170.0
  • Bit_score: 64
  • Evalue 2.90e-08
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=17 to=89 evalue=1.3e-09 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 1.00e+00

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Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCGATCGCACCTCACGAAGACGTGACTATGGCGTGGGCGGATCGGGTCGTGGCGCACGATCCGCTCGTATACCTTGCCTTGCGGCAATTGCCATATGCGCCCCAGCCGCTTGACCCGGATTACGAGGATTGGCTGCAAAATGGACGCATTGGGCTGATCCGTGCGGCCAAAGCATGGGACCCTGCACGCGGCGCATGGGGCTCGTATGCTGCGACGTGTATCCGCCATGAAATATTTAAGGGGGTGCGCCGGGAACGATTGCGCGAGGAGTGGACGTCGCTTGATGCGCCTGCGGCCAAAGATTCCGCCGCGACACTGGGCGATATGGTCCCCGACGCTCGCGCCGCAGACGCCTTTGAACGCATCGAATGGTCGGATGTGGACTGGGATCAAGTGGCACGGAACGGCATGACGCCCACCGAGTACCGCGTCTGGCGATCCCAGAAGCAACGGCAGGCCGTCGCGGCGAAAACCGCCGGGATTTCGCAATCTTTGGTCAGTCGCTACCGACGCCGTGTTCACCAGTTCTGGCGCCAATGGTATGCCGATCATGGATTATAA
PROTEIN sequence
Length: 188
MAIAPHEDVTMAWADRVVAHDPLVYLALRQLPYAPQPLDPDYEDWLQNGRIGLIRAAKAWDPARGAWGSYAATCIRHEIFKGVRRERLREEWTSLDAPAAKDSAATLGDMVPDARAADAFERIEWSDVDWDQVARNGMTPTEYRVWRSQKQRQAVAAKTAGISQSLVSRYRRRVHQFWRQWYADHGL*