| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:EED05961.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alic |
UNIPROT
DB: UniProtKB |
28.1 | 178.0 | 66 | 3.80e-08 | B7DV94_9BACL | |
| RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DV94_9BACL (db=UNIREF evalue=9.4e-09 bit_score=66.2 identity=28.1 coverage=88.82978723404256) | similarity |
UNIREF
DB: UNIREF |
28.0 | 88.0 | 66 | 9.00e+00 | aac:Aaci_1081 |
| FliA/WhiG subfamily RNA polymerase sigma-28 subunit | similarity |
KEGG
DB: KEGG |
28.8 | 170.0 | 64 | 2.90e-08 | aac:Aaci_1081 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=17 to=89 evalue=1.3e-09 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | aac:Aaci_1081 |
| (db=HMMPfam db_id=PF04542 from=19 to=87 evalue=1.1e-09 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | aac:Aaci_1081 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=11 to=182 evalue=4.0e-06 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 4.00e+00 | aac:Aaci_1081 |