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RBG2_108_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Fis family two component sigma54 specific transcriptional regulator Tax=RBG_16_Deltaproteobacteria_49_23_curated UNIPROT
DB: UniProtKB
92.1 216.0 401 5.70e-109 ggdbv1_87081324
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
51.2 215.0 221 2.80e-55 gsu:GSU2915
Sigma-54-dependent transcriptional response regulator n=3 Tax=Geobacter RepID=B5EA16_GEOBB (db=UNIREF evalue=0.0 bit_score=220.7 identity=52.1 coverage=98.6111111111111) similarity UNIREF
DB: UNIREF
52.0 98.0 220 0.0 gsu:GSU2915
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=168 to=181 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 gsu:GSU2915
seg (db=Seg db_id=seg from=166 to=183) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 gsu:GSU2915
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=154 evalue=1.2e-38) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 gsu:GSU2915
SENSOR HISTIDINE KINASE (db=HMMPanther db_id=PTHR23283:SF31 from=2 to=122 evalue=2.1e-20) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 gsu:GSU2915
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=2 to=122 evalue=2.1e-20) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 gsu:GSU2915
CheY-like (db=superfamily db_id=SSF52172 from=2 to=189 evalue=4.6e-48 interpro_id=IPR011006 interpro_description=CheY-like superfamily) iprscan interpro
DB: superfamily
0.0 0.0 0 4.00e+00 gsu:GSU2915
(db=HMMPfam db_id=PF00072 from=5 to=114 evalue=5.2e-30 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 gsu:GSU2915
no description (db=HMMSmart db_id=SM00448 from=3 to=114 evalue=6.5e-38 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 6.00e+00 gsu:GSU2915
(db=HMMPfam db_id=PF00158 from=143 to=216 evalue=9.4e-21 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 9.00e+00 gsu:GSU2915
SIGMA54_INTERACT_4 (db=ProfileScan db_id=PS50045 from=143 to=216 evalue=17.997 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.70e+01 gsu:GSU2915
RESPONSE_REGULATORY (db=ProfileScan db_id=PS50110 from=4 to=118 evalue=40.416 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 4.00e+01 gsu:GSU2915