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RBG2_284_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_13_Chloroflexi_51_36_curated UNIPROT
DB: UniProtKB
83.9 218.0 355 4.80e-95 ggdbv1_86763536
RNA polymerase sigma factor n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0G7_DEHLB (db=UNIREF evalue=0.0 bit_score=220.3 identity=51.2 coverage=95.8715596330275) similarity UNIREF
DB: UNIREF
51.0 95.0 220 0.0 dly:Dehly_0793
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
50.2 217.0 220 3.70e-55 dly:Dehly_0793
SIGMA70_1 (db=PatternScan db_id=PS00715 from=150 to=163 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 dly:Dehly_0793
seg (db=Seg db_id=seg from=68 to=78) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dly:Dehly_0793
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=112 to=193 evalue=1.2e-44 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fac iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 dly:Dehly_0793
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=150 to=163 evalue=1.8e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 dly:Dehly_0793
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=174 to=182 evalue=1.8e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 dly:Dehly_0793
(db=HMMPfam db_id=PF04542 from=126 to=196 evalue=6.5e-22 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 dly:Dehly_0793
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=112 to=195 evalue=7.3e-47) iprscan interpro
DB: Gene3D
0.0 0.0 0 7.00e+00 dly:Dehly_0793