Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_13_Chloroflexi_51_36_curated |
UNIPROT
DB: UniProtKB |
83.9 | 218.0 | 355 | 4.80e-95 | ggdbv1_86763536 | |
RNA polymerase sigma factor n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0G7_DEHLB (db=UNIREF evalue=0.0 bit_score=220.3 identity=51.2 coverage=95.8715596330275) | similarity |
UNIREF
DB: UNIREF |
51.0 | 95.0 | 220 | 0.0 | dly:Dehly_0793 |
RpoD subfamily RNA polymerase sigma-70 subunit | similarity |
KEGG
DB: KEGG |
50.2 | 217.0 | 220 | 3.70e-55 | dly:Dehly_0793 |
SIGMA70_1 (db=PatternScan db_id=PS00715 from=150 to=163 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | dly:Dehly_0793 |
seg (db=Seg db_id=seg from=68 to=78) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | dly:Dehly_0793 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=112 to=193 evalue=1.2e-44 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fac | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | dly:Dehly_0793 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=150 to=163 evalue=1.8e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 1.00e+00 | dly:Dehly_0793 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=174 to=182 evalue=1.8e-08 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 1.00e+00 | dly:Dehly_0793 |
(db=HMMPfam db_id=PF04542 from=126 to=196 evalue=6.5e-22 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | dly:Dehly_0793 |
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=112 to=195 evalue=7.3e-47) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 7.00e+00 | dly:Dehly_0793 |