Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
PAS domain S-box Tax=RBG_13_Chloroflexi_51_52_curated |
UNIPROT
DB: UniProtKB |
44.9 | 552.0 | 473 | 7.70e-130 | ggdbv1_86739578 | |
pas/pac sensor signal transduction histidine kinase | similarity |
KEGG
DB: KEGG |
28.8 | 612.0 | 254 | 1.10e-64 | ppn:Palpr_2166 |
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Paludibacter propionicigenes WB4 RepID=E4T6F8_PALPW (db=UNIREF evalue=1.2e-64 bit_score=253.8 identity=28.8 coverage=72.9498164014688) | similarity |
UNIREF
DB: UNIREF |
28.0 | 72.0 | 253 | 1.00e+00 | ppn:Palpr_2166 |
coiled-coil (db=Coil db_id=coil from=187 to=224 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | null | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=62) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=163) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=137) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=113) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=87) | iprscan |
interpro
DB: TMHMM |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
seg (db=Seg db_id=seg from=120 to=132) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | ppn:Palpr_2166 |
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=218 to=328 evalue=3.0e-27) | iprscan | interpro | 0.0 | 0.0 | 0 | 3.00e-27 | ppn:Palpr_2166 |
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=324 to=791 evalue=1.4e-24) | iprscan | interpro | 0.0 | 0.0 | 0 | 1.40e-24 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00091 from=712 to=778 evalue=0.00072 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 7.20e-04 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00086 from=413 to=453 evalue=0.0031 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 3.10e-03 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00091 from=340 to=407 evalue=0.0083 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 8.30e-03 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00086 from=660 to=700 evalue=0.063 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 6.30e-02 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00086 from=288 to=328 evalue=0.08 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 8.00e-02 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00091 from=465 to=535 evalue=0.5 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 5.00e-01 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00086 from=538 to=578 evalue=0.64 interpro_id=IPR001610 interpro_description=PAC motif GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 6.40e-01 | ppn:Palpr_2166 |
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=324 to=791 evalue=1.4e-24) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 1.00e+00 | ppn:Palpr_2166 |
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=336 to=460 evalue=1.8e-17 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 1.00e+00 | ppn:Palpr_2166 |
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=452 to=576 evalue=1.6e-18) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | ppn:Palpr_2166 |
(db=HMMPfam db_id=PF00989 from=595 to=697 evalue=1.0e-09 interpro_id=IPR013767 interpro_description=PAS fold GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00091 from=590 to=656 evalue=1.3e-09 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 1.00e+00 | ppn:Palpr_2166 |
(db=HMMPfam db_id=PF08447 from=364 to=442 evalue=2.7e-06 interpro_id=IPR013655 interpro_description=PAS fold-3 GO=Molecular Function: protein binding (GO:0005515)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | ppn:Palpr_2166 |
no description (db=HMMSmart db_id=SM00091 from=215 to=282 evalue=2.1e-09 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 2.00e+00 | ppn:Palpr_2166 |
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=593 to=707 evalue=4.3e-26) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 4.00e+00 | ppn:Palpr_2166 |
(db=HMMPfam db_id=PF00989 from=216 to=324 evalue=5.4e-12 interpro_id=IPR013767 interpro_description=PAS fold GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 5.00e+00 | ppn:Palpr_2166 |
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=327 to=451 evalue=5.3e-19) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 5.00e+00 | ppn:Palpr_2166 |
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=461 to=585 evalue=5.5e-18 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 5.00e+00 | ppn:Palpr_2166 |
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=200 to=326 evalue=6.6e-27) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 6.00e+00 | ppn:Palpr_2166 |
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=586 to=707 evalue=7.8e-23 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 7.00e+00 | ppn:Palpr_2166 |
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=715 to=803 evalue=7.6e-11) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 7.00e+00 | ppn:Palpr_2166 |
PAS (db=ProfileScan db_id=PS50112 from=717 to=752 evalue=9.942 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 9.00e+00 | ppn:Palpr_2166 |
PAC (db=ProfileScan db_id=PS50113 from=659 to=709 evalue=9.046 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 9.00e+00 | ppn:Palpr_2166 |
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=211 to=335 evalue=9.4e-23 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 9.00e+00 | ppn:Palpr_2166 |
PAC (db=ProfileScan db_id=PS50113 from=537 to=587 evalue=9.737 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 9.00e+00 | ppn:Palpr_2166 |
PAC (db=ProfileScan db_id=PS50113 from=412 to=462 evalue=10.322 interpro_id=IPR000700 interpro_description=PAS-associated, C-terminal GO=Molecular Function: two-component sensor activity (GO:0000155), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.00e+01 | ppn:Palpr_2166 |
PAS (db=ProfileScan db_id=PS50112 from=463 to=532 evalue=11.616 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.10e+01 | ppn:Palpr_2166 |
PAS (db=ProfileScan db_id=PS50112 from=360 to=407 evalue=12.743 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.20e+01 | ppn:Palpr_2166 |
PAS (db=ProfileScan db_id=PS50112 from=213 to=284 evalue=13.741 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.30e+01 | ppn:Palpr_2166 |
PAS (db=ProfileScan db_id=PS50112 from=595 to=630 evalue=13.355 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.30e+01 | ppn:Palpr_2166 |