Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_13_Chloroflexi_51_52_curated |
UNIPROT
DB: UniProtKB |
100.0 | 68.0 | 139 | 1.30e-30 | ggdbv1_86740314 | |
cold-shock protein | similarity |
KEGG
DB: KEGG |
47.0 | 66.0 | 65 | 6.20e-09 | rpj:N234_31360 |
DNA-binding cold-shock protein n=2 Tax=Enterococcus casseliflavus RepID=C9AWU7_ENTCA (db=UNIREF evalue=3.9e-09 bit_score=65.9 identity=49.2 coverage=89.85507246376811) | similarity |
UNIREF
DB: UNIREF |
49.0 | 89.0 | 65 | 3.00e+00 | rpj:N234_31360 |
(db=HMMPfam db_id=PF00313 from=1 to=64 evalue=2.3e-17 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | rpj:N234_31360 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=67 evalue=3.0e-17 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | rpj:N234_31360 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=66 evalue=3.6e-13 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 3.00e+00 | rpj:N234_31360 |
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=66 evalue=3.7e-08) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 3.00e+00 | rpj:N234_31360 |
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=67 evalue=4.5e-18 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMPIR |
0.0 | 0.0 | 0 | 4.00e+00 | rpj:N234_31360 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=39 to=57 evalue=5.3e-08 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 5.00e+00 | rpj:N234_31360 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=4 to=19 evalue=5.3e-08 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 5.00e+00 | rpj:N234_31360 |
COLDSHOCK (db=FPrintScan db_id=PR00050 from=24 to=33 evalue=5.3e-08 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 5.00e+00 | rpj:N234_31360 |
no description (db=HMMSmart db_id=SM00357 from=3 to=66 evalue=7.6e-13 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 7.00e+00 | rpj:N234_31360 |