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RBG1351_46_4 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
AraC family transcriptional regulator; K13653 AraC family transcriptional regulator Tax=RBG_13_Chloroflexi_51_18_curated UNIPROT
DB: UniProtKB
100.0 251.0 510 1.90e-141 ggdbv1_86738015
Regulatory protein soxS n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PRJ9_9BACT (db=UNIREF evalue=1.4e-57 bit_score=228.8 identity=45.2 coverage=91.85185185185185) similarity UNIREF
DB: UNIREF
45.0 91.0 228 1.00e+00 pbj:VN24_22770
AraC family transcriptional regulator similarity KEGG
DB: KEGG
43.5 271.0 226 1.10e-56 pbj:VN24_22770
HTH_ARAC_FAMILY_1 (db=PatternScan db_id=PS00041 from=58 to=100 evalue=0.0 interpro_id=IPR018062 interpro_description=Helix-turn-helix, AraC type, subdomain 2 GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 pbj:VN24_22770
(db=HMMPfam db_id=PF00165 from=14 to=54 evalue=0.00019) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.90e-04 pbj:VN24_22770
(db=HMMPfam db_id=PF06445 from=128 to=259 evalue=1.0e-10 interpro_id=IPR010499 interpro_description=Bacterial transcription activator, effector binding) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 pbj:VN24_22770
Homeodomain-like (db=superfamily db_id=SSF46689 from=3 to=56 evalue=1.0e-12 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 pbj:VN24_22770
HTHARAC (db=FPrintScan db_id=PR00032 from=88 to=104 evalue=1.1e-05 interpro_id=IPR020449 interpro_description=Transcription regulator HTH, AraC- type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 pbj:VN24_22770
Homeodomain-like (db=superfamily db_id=SSF46689 from=57 to=121 evalue=1.1e-14 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 pbj:VN24_22770
no description (db=HMMSmart db_id=SM00342 from=21 to=104 evalue=1.6e-26 interpro_id=IPR018060 interpro_description=Helix-turn-helix, AraC type, DNA binding GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 pbj:VN24_22770
HTHARAC (db=FPrintScan db_id=PR00032 from=73 to=88 evalue=1.1e-05 interpro_id=IPR020449 interpro_description=Transcription regulator HTH, AraC- type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 pbj:VN24_22770
Probable bacterial effector-binding domain (db=superfamily db_id=SSF55136 from=128 to=251 evalue=2.9e-07 interpro_id=IPR011256 interpro_description=Regulatory factor, effector, bacterial) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 pbj:VN24_22770
no description (db=Gene3D db_id=G3DSA:1.10.10.60 from=59 to=107 evalue=2.2e-10 interpro_id=IPR012287 interpro_description=Homeodomain-related GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 pbj:VN24_22770
(db=HMMPfam db_id=PF00165 from=68 to=104 evalue=4.6e-07) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 pbj:VN24_22770
THIJ/PFPI (db=HMMPanther db_id=PTHR11019 from=5 to=106 evalue=4.5e-19) iprscan interpro
DB: HMMPanther
0.0 0.0 0 4.00e+00 pbj:VN24_22770
ARAC FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN (db=HMMPanther db_id=PTHR11019:SF11 from=5 to=106 evalue=4.5e-19) iprscan interpro
DB: HMMPanther
0.0 0.0 0 4.00e+00 pbj:VN24_22770
no description (db=Gene3D db_id=G3DSA:1.10.10.60 from=5 to=58 evalue=5.3e-13 interpro_id=IPR012287 interpro_description=Homeodomain-related GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 pbj:VN24_22770
HTH_ARAC_FAMILY_2 (db=ProfileScan db_id=PS01124 from=8 to=106 evalue=27.851 interpro_id=IPR018060 interpro_description=Helix-turn-helix, AraC type, DNA binding GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.70e+01 pbj:VN24_22770