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RBG9_29_24 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated UNIPROT
DB: UniProtKB
100.0 241.0 480 1.10e-132 ggdbv1_87241045
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
44.7 188.0 150 6.80e-34 cag:Cagg_0898
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G5V6_CHLAD (db=UNIREF evalue=7.3e-34 bit_score=149.8 identity=44.7 coverage=75.20661157024794) similarity UNIREF
DB: UNIREF
44.0 75.0 149 7.00e+00 cag:Cagg_0898
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=81 to=113 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 cag:Cagg_0898
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=43 to=130 evalue=1.3e-21) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 cag:Cagg_0898
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=33 to=147 evalue=2.6e-26 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 cag:Cagg_0898
(db=HMMPfam db_id=PF08281 from=158 to=209 evalue=3.3e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 cag:Cagg_0898
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=148 to=213 evalue=3.6e-11 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 cag:Cagg_0898
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=54 to=213 evalue=3.4e-43 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 3.00e+00 cag:Cagg_0898
(db=HMMPfam db_id=PF04542 from=59 to=128 evalue=4.3e-21 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 cag:Cagg_0898