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SCNpilot_BF_INOC_scaffold_3090_curated_7

Organism: scnpilot_dereplicated_Clostridiales_2

partial RP 42 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(6653..6994)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 113.0
  • Bit_score: 170
  • Evalue 8.60e-40
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 113.0
  • Bit_score: 160
  • Evalue 2.30e-37
Pseudouridine synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1B0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 113.0
  • Bit_score: 170
  • Evalue 6.10e-40

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Taxonomy

Clostridium leptum CAG:27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 342
ATCGGTCGGCACCCGGTCAAACGAAAACAAATGGCAGTGACAGAGAGAAATTCCAAACCAGCAGTGACCCATTATGAAGTGATTCAACGATATCAAGGATACACTCACATGCGTTTTCGCCTGGAAACGGGAAGGACCCATCAAATACGTGTTCATATGGCTTATCTGGGTCATCCGATTTTGGGCGACACGGTTTATGGAAGCAAAAAGAACACAAAAGGCTTGCAAGGGCAGTGCCTGCATGCCAAAAAAATCGGGTTTGTTCATCCAAACGGTCAGTATATGGAGTTTACATCGCCTCTGCCCGAATATTTTTGTGATGTATTAAAAAAACTATTGTAG
PROTEIN sequence
Length: 114
IGRHPVKRKQMAVTERNSKPAVTHYEVIQRYQGYTHMRFRLETGRTHQIRVHMAYLGHPILGDTVYGSKKNTKGLQGQCLHAKKIGFVHPNGQYMEFTSPLPEYFCDVLKKLL*