ggKbase home page

CHLO_5_108_2

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(2413..2988)

Top 3 Functional Annotations

Value Algorithm Source
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 190.0
  • Bit_score: 127
  • Evalue 4.90e-27
Cell surface protein {ECO:0000313|EMBL:AKB73472.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacu UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 190.0
  • Bit_score: 127
  • Evalue 2.40e-26
Cell surface protein n=1 Tax=Methanosarcina acetivorans C2A RepID=Q8TTT9_METAC (db=UNIREF evalue=4.8e-24 bit_score=117.1 identity=42.2 coverage=84.375) similarity UNIREF
DB: UNIREF
  • Identity: 42.0
  • Coverage: 84.0
  • Bit_score: 117
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina lacustris → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 576
GTGAACCCGACTACCTTCACCCCGGTGGTCATGCATGTCGTCGCGGAGTACATCCTCCCCGAGGCTTCGTTTGAGGCGGACGCAGCAGTTTGTGAAGACACAGAACTGGTCTTCACTAACACCACGACCGTGGGCGTCCCGCCGATAACCTGGTACGAGTGGGACTTCGGCGATGGCATTACATCTACCGAGGAGAATCCAGTTCACACCTTTGCGGACGCAGGTACTTACACTGTCACGCTCGAGGCGTGCAACCGGGAGGGCTGCACTGAGTTCAGCCAGGCTGTTGAGGTCTTGCCGAAACCGGAAGCTTCCTTCACCTTTGTTTCCTACTCGTTGGAGGTCACCTTCAGCAATACATCGCTGTATGGTGAGACCTTCCTGTGGGACTTCGGTGATGGAATCACAAGCACAGAGGAAAACCCTGTTCATGTGTTTGCTACAGAAGGACCCTACACGGTGACGTTGACAGTGGTCAACGGATGCGGTGTGGCAACCTTCGAGGCAGTCGTCACACTTGACCAGGTATTCGTCTATTTCTTGCCGCTTCAGTACAAGCACGTTCCACTACCTTAA
PROTEIN sequence
Length: 192
VNPTTFTPVVMHVVAEYILPEASFEADAAVCEDTELVFTNTTTVGVPPITWYEWDFGDGITSTEENPVHTFADAGTYTVTLEACNREGCTEFSQAVEVLPKPEASFTFVSYSLEVTFSNTSLYGETFLWDFGDGITSTEENPVHVFATEGPYTVTLTVVNGCGVATFEAVVTLDQVFVYFLPLQYKHVPLP*