ggKbase home page

CHLO_5_120_27

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: 24504..25094

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Chloroflexi_58_14_curated UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 234
  • Evalue 1.10e-58
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured prokaryote RepID=H5SL68_9ZZZZ (db=UNIREF evalue=1.3e-29 bit_score=135.6 identity=43.4 coverage=85.27918781725889) similarity UNIREF
DB: UNIREF
  • Identity: 43.0
  • Coverage: 85.0
  • Bit_score: 135
  • Evalue 1.00e+00
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 175.0
  • Bit_score: 122
  • Evalue 1.20e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_58_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 591
ATGTCCAACTGGAATGAGGTTGATGACATTCAACTGCTAAAATTTGCCCAAGAAGGCAATACAGAAGCATTCGGTGCGATCTACGAGCGGTTTGCTGACAAGGTATTTCGCTATCTCAATGCGCACTTGGGGAACAACCTGGATGCAGAGGATATTACTGAGGAGGTATTCATCCGAGTCTGGCGGTCTTTACCAGACTACCATGAACGAGGGACACCGTTTCTTTCTTATGTATTTCGGATTGCTCGCAATGCGCTGATTGATCATTACCGGCGGGAACGACGTGTGGTTGGTCAGTTGTCCTCAGAAGATGTGATGATTGCTGATCATAAACCTGGGCCGGGTGAGGTCGTTGGCGGTCAACTGGAGCAACAGGAGCTACGCGAAGCCCTGGATGGATTAAAAGATGATTACCGATCCGTATTGGTCATGAGATTTTTGAGTGATATGAGCCCTGAAGAGACAGCTCATGCGATGGGTCGTTCGGCTGGGGCTGTGAGGGTACTGCAACATCGTGCCCTGGCGGCCTTGCGGACAAAATTCGAGAAGAGCAAAGGTAAACGAGATGGCCGTAAAGCGCGAGGGGATTGA
PROTEIN sequence
Length: 197
MSNWNEVDDIQLLKFAQEGNTEAFGAIYERFADKVFRYLNAHLGNNLDAEDITEEVFIRVWRSLPDYHERGTPFLSYVFRIARNALIDHYRRERRVVGQLSSEDVMIADHKPGPGEVVGGQLEQQELREALDGLKDDYRSVLVMRFLSDMSPEETAHAMGRSAGAVRVLQHRALAALRTKFEKSKGKRDGRKARGD*